myRT

myRT report for GCA_001475985.1_ASM147598v1

Download annotations/find similar RTs

Seq: LDQJ01000023.1 Enterobacter cancerogenus strain NS31 contig_23, whole genome shotgun sequence (120172 bp)
Overview 1 RT 1: 84462-88431 bp Neighborhood of RT #1 [84462, 88431] PRK06500 TIR-like RVT-Retrons Feature: gene Location: 84462-85211 bp Ori: KTQ77607.1 Feature: domain Description: PRK06500 Location: 84477-85206 bp Feature: domain Description: PRK06500 Location: 84477-85206 bp Feature: gene Location: 85679-86518 bp Ori: KTQ77608.1 Feature: domain Description: TIR-like Location: 86084-86438 bp Feature: domain Description: TIR-like Location: 86084-86438 bp Feature: gene Location: 86569-87528 bp Ori: KTQ77609.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86743-87274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86743-87274 bp Feature: gene Location: 87559-87750 bp Feature: gene Location: 88204-88431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06500 (SDR family oxidoreductase), TIR-like (pfam10137), RVT-Retrons

Seq: LDQJ01000008.1 Enterobacter cancerogenus strain NS31 contig_8, whole genome shotgun sequence (169559 bp)
Overview 1 RT 1: 17003-25601 bp Neighborhood of RT #1 [17003, 25603] PRK10658 PRK11462 RVT-UG5 nitrilase SymE_toxin COG3943 Feature: gene Location: 17003-19321 bp Ori: KTQ82396.1 Feature: domain Description: PRK10658 Location: 17006-19001 bp Feature: domain Description: PRK10658 Location: 17006-19001 bp Feature: gene Location: 19334-20725 bp Ori: KTQ82397.1 Feature: domain Description: PRK11462 Location: 19340-20723 bp Feature: domain Description: PRK11462 Location: 19340-2 072 3 bp Feature: gene Location: 21596-24574 bp Ori: KTQ82398.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22115-22625 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 115-2 2 62 5 bp Feature: domain Description: nitrilase Location: 24047-24494 bp Feature: domain Description: nitrilase Location: 2 4047-2 4494 bp Feature: gene Location: 24923-25264 bp Ori: KTQ82399.1 Feature: domain Description: SymE_toxin Location: 24980-25115 bp Feature: domain Description: SymE_toxin Location: 2 4980-2 5115 bp Feature: gene Location: 25325-25603 bp Ori: KTQ82400.1 Feature: domain Description: COG3943 Location: 25364-25601 bp Feature: domain Description: COG3943 Location: 2 5364-2 5601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10658 (putative alpha-glucosidase; Provisional), PRK11462 (putative transporter; Provisional), RVT-UG5, nitrilase (cl11424), SymE_toxin (pfam08845), COG3943 (Uncharacterized conserved protein )