myRT

myRT report for GCA_001477695.1_Salmonella_enterica_CVM_N29310-SQ_v1.0

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Seq: JYTO01000005.1 Salmonella enterica subsp. enterica serovar Muenster strain CVM N29310 N29310_contig_5, whole genome shotgun sequence (226827 bp)
Overview 1 RT 1: 59036-64948 bp Neighborhood of RT #1 [59036, 64953] HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 59036-59167 bp Feature: gene Location: 59577-59774 bp Feature: domain Description: HTH_Tnp_1 Location: 59592-59709 bp Feature: domain Description: HTH_Tnp_1 Location: 59592-59709 bp Feature: gene Location: 60065-61672 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60356-60953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60356-60953 bp Feature: domain Description: TIR_2 Location: 61277-61637 bp Feature: domain Description: TIR_2 Location: 61 277-61 637 bp Feature: gene Location: 62285-64618 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62375-62483 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62375-62483 bp Feature: domain Description: COG3378 Location: 63101-64610 bp Feature: domain Description: COG3378 Location: 631 01 -6461 0 bp Feature: gene Location: 64633-64953 bp Feature: domain Description: DUF5375 Location: 64636-64948 bp Feature: domain Description: DUF5375 Location: 64636-64948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)