myRT

myRT report for GCA_001478645.1_Salmonella_enterica_CVM_N29351-R_v1.0

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Seq: JYTY01000030.1 Salmonella enterica subsp. enterica serovar Bredeney strain CVM N29351 N29351_contig_30, whole genome shotgun sequence (67452 bp)
Overview 1 RT 1: 1-8277 bp Neighborhood of RT #1 [1, 8291] PRK08026 Flag1_repress RVT-UG8 RVT-UG3 AlpA Feature: gene Location: 1-1302 bp Ori: KTW93001.1 Feature: domain Description: PRK08026 Location: 4-1300 bp Feature: domain Description: PRK08026 Location: 4-1 300 bp Feature: gene Location: 1370-1909 bp Ori: KTW93002.1 Feature: domain Description: Flag1_repress Location: 1394-1886 bp Feature: domain Description: Flag1 _repress Location: 1 394-1 886 bp Feature: gene Location: 3490-5502 bp Ori: KTW93003.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4066-4516 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4066-451 6 bp Feature: gene Location: 5493-6767 bp Ori: KTW93004.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5781-6276 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5781 -6276 bp Feature: gene Location: 7108-7959 bp Feature: gene Location: 8082-8291 bp Ori: KTW93006.1 Feature: domain Description: AlpA Location: 8088-8277 bp Feature: domain Description: AlpA Location: 8088-8277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08026 (FliC/FljB family flagellin), Flag1_repress (pfam03614), RVT-UG8, RVT-UG3, AlpA (COG3311)