myRT

myRT report for GCA_001482405.1_ASM148240v1

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Seq: LPXO01000003.1 Ponticoccus marisrubri strain SJ5A-1 ZB100002, whole genome shotgun sequence (410294 bp)
Overview 1 RT 1: 9346-18144 bp Neighborhood of RT #1 [9346, 18311] AlpA Phage_int_SAM_4 INT_IntI_C RVT-UG2 DUF45 COG0610 Feature: gene Location: 9346-9810 bp Ori: KUF11340.1 Feature: domain Description: AlpA Location: 9553-9754 bp Feature: domain Description: AlpA Location: 9553-9754 bp Feature: gene Location: 10080-10967 bp Ori: KUF11341.1 Feature: domain Description: Phage_int_SAM_4 Location: 10107-10344 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 01 07-1 0344 bp Feature: domain Description: INT_IntI_C Location: 10386-10881 bp Feature: domain Description: INT_IntI_C Location: 1 0386-1 0881 bp Feature: gene Location: 12945-14237 bp Ori: KUF11342.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13131-13914 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 31 31 -1 391 4 bp Feature: gene Location: 14531-15250 bp Ori: KUF11343.1 Feature: domain Description: DUF45 Location: 14621-15224 bp Feature: domain Description: DUF45 Location: 1 4621 -1 5224 bp Feature: gene Location: 15240-18311 bp Ori: KUF11344.1 Feature: domain Description: COG0610 Location: 15456-18144 bp Feature: domain Description: COG061 0 Location: 1 5456-1 81 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), RVT-UG2, DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )