myRT

myRT report for GCA_001482545.1_ASM148254v1

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Seq: LLJO01000036.1 Citrobacter freundii strain AMA 754 contig_36, whole genome shotgun sequence (11730 bp)
Overview 1 RT 1: 9026-11471 bp Neighborhood of RT #1 [9026, 11620] PRK13746 RVT-GII GIIM Feature: gene Location: 9026-9817 bp Feature: domain Description: PRK13746 Location: 9029-9809 bp Feature: domain Description: PRK1 3746 Location: 9029-9809 bp Feature: gene Location: 10061-10270 bp Feature: gene Location: 10286-11620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10589-11207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0589-1 1 207 bp Feature: domain Description: GIIM Note: maturase Location: 11258-11471 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 258-1 1 471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK13746 (aminoglycoside resistance protein; Provisional)

Seq: LLJO01000004.1 Citrobacter freundii strain AMA 754 contig_4, whole genome shotgun sequence (985616 bp)
Overview 1 RT 1: 244023-248915 bp Neighborhood of RT #1 [244023, 248915] P Q RVT-Retrons Feature: gene Location: 244023-245789 bp Feature: domain Description: P Location: 244050-245784 bp Feature: domain Description: P Location: 2 44050-2 45784 bp Feature: gene Location: 245789-246820 bp Feature: domain Description: Q Location: 245846-246818 bp Feature: domain Description: Q Location: 2 45846-2 46818 bp Feature: gene Location: 246837-247796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 247002-247554 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 47002 -2 47554 bp Feature: gene Location: 247795-247950 bp Feature: gene Location: 247959-248915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons