myRT

myRT report for GCA_001483055.1_ASM148305v1

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Seq: LOEJ01000039.1 Klebsiella pneumoniae strain K1 AOT20_contig000039, whole genome shotgun sequence (42780 bp)
Overview 1 RT 1: 3934-12564 bp Neighborhood of RT #1 [3934, 12569] FimC FimD RVT-UG4 PRK09692 YqgA Feature: gene Location: 3934-4698 bp Ori: KUF65726.1 Gene: fimC_5 Feature: domain Description: FimC Location: 3979-4681 bp Feature: domain Description: FimC Location: 3979-4681 bp Feature: gene Location: 4745-7339 bp Ori: KUF65727.1 Gene: fimD_6 Feature: domain Description: FimD Location: 4787-7328 bp Feature: domain Description: FimD Location: 4787-7328 bp Feature: gene Location: 7336-9417 bp Ori: KUF65728.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7747-8191 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7747-81 91 bp Feature: gene Location: 10175-11038 bp Ori: KUF65729.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 10199-11036 bp Feature: domain Description: PRK09692 Location: 1 01 99-1 1 036 bp Feature: gene Location: 11856-12569 bp Ori: KUF65730.1 Gene: ydfK_3 Feature: domain Description: YqgA Location: 11862-12564 bp Feature: domain Description: YqgA Location: 1 1 862-1 2564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811)

Seq: LOEJ01000091.1 Klebsiella pneumoniae strain K1 AOT20_contig000092, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1155 bp Neighborhood of RT #1 [60, 1547] RVT-GII Feature: gene Location: 60-1547 bp Ori: KUF64214.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII