myRT

myRT report for GCA_001484255.1_ASM148425v1

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Seq: LLYE01000126.1 Escherichia coli strain AY62 2375, whole genome shotgun sequence (171011 bp)
Overview 1 RT 1: 36438-40320 bp Neighborhood of RT #1 [36438, 40325] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 36438-36896 bp Feature: domain Description: dut Location: 36444-36891 bp Feature: domain Description: dut Location: 36444-36891 bp Feature: gene Location: 37003-37599 bp Feature: domain Description: slmA Location: 37009-37585 bp Feature: domain Description: slmA Location: 37009-37585 bp Feature: gene Location: 37645-38604 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37780-38329 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37780-38329 bp Feature: gene Location: 38902-39543 bp Feature: domain Description: pyrE Location: 38905-39538 bp Feature: domain Description: pyrE Location: 38905-39538 bp Feature: gene Location: 39609-40325 bp Feature: domain Description: rph Location: 39612-40320 bp Feature: domain Description: rph Location: 3961 2-40320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: LLYE01000004.1 Escherichia coli strain AY62 2131, whole genome shotgun sequence (3497 bp)
Overview 1 RT 1: 1-3497 bp Neighborhood of RT #1 [1, 3497] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-128 bp Feature: domain Description: DUF905 Location: 31-127 bp Feature: domain Description: DUF905 Location: 31-12 7 bp Feature: gene Location: 196-693 bp Feature: domain Description: PRK13732 Location: 199-691 bp Feature: domain Description: PRK13732 Location: 199-691 bp Feature: gene Location: 843-2744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1941 bp Feature: domain Description: Intron_maturas2 Location: 2055-2313 bp Feature: domain Description: Intron_maturas2 Location: 2 055-2 313 bp Feature: domain Description: HNHc Note: nucleases Location: 2487-2649 bp Feature: domain Description: HNHc Note: nucleases Location: 2 487-2 649 bp Feature: gene Location: 3422-3497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)