myRT

myRT report for GCA_001484415.1_ASM148441v1

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Seq: LLYP01000076.1 Escherichia coli strain AZ77 4882, whole genome shotgun sequence (12857 bp)
Overview 1 RT 1: 2637-9148 bp Neighborhood of RT #1 [2637, 9273] HTH_36 AAA_21 RVT-Retrons INT_Rci_Hp1_C INT_Rci_Hp1_C Feature: gene Location: 2637-3170 bp Feature: domain Description: HTH_36 Location: 2823-2979 bp Feature: domain Description: HTH_36 Location: 2823-2979 bp Feature: gene Location: 3630-5747 bp Feature: domain Description: AAA_21 Location: 3705-4614 bp Feature: domain Description: AAA_21 Location: 3705-461 4 bp Feature: gene Location: 5914-7017 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6064-6616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6064-661 6 bp Feature: gene Location: 7226-7804 bp Feature: gene Location: 7816-9273 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8194-8392 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 81 94-8392 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8677-9148 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 8677-91 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), AAA_21 (pfam13304), RVT-Retrons, INT_Rci_Hp1_C (cd00796)

Seq: LLYP01000173.1 Escherichia coli strain AZ77 5076, whole genome shotgun sequence (65693 bp)
Overview 1 RT 1: 23127-27633 bp Neighborhood of RT #1 [23127, 27644] PRK09678 RVT-Retrons COG3183 Feature: gene Location: 23127-23399 bp Feature: domain Description: PRK09678 Location: 23136-23292 bp Feature: domain Description: PRK09678 Location: 2 3136-2 32 92 bp Feature: gene Location: 24045-25013 bp Feature: gene Location: 25015-25947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25117-25711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 5117-2 5711 bp Feature: gene Location: 26430-26615 bp Feature: gene Location: 26994-27644 bp Feature: domain Description: COG3183 Location: 27315-27633 bp Feature: domain Description: COG3183 Location: 2 7315-2 7633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, COG3183 (Predicted restriction endonuclease, HNH family )