myRT

myRT report for GCA_001484965.1_ASM148496v1

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Seq: LLYY01000003.1 Bacillus shacheensis strain HNA-14 contig3, whole genome shotgun sequence (401377 bp)
Overview 1 RT 1: 63268-69612 bp Neighborhood of RT #1 [63268, 69629] ProW PBP2_OpuAC_like PBP2_OpuAC_like RVT-GII GIIM FhlA COG4585 CitB Feature: gene Location: 63268-64104 bp Feature: domain Description: ProW Location: 63289-64099 bp Feature: domain Description: ProW Location: 63289-64099 bp Feature: gene Location: 64292-65215 bp Feature: domain Description: PBP2_OpuAC_like Location: 64445-64874 bp Feature: domain Description: PBP2_OpuAC_like Location: 64445-64874 bp Feature: domain Description: PBP2_OpuAC_like Location: 64907-65204 bp Feature: domain Description: PBP2_OpuAC_like Location: 64907-65204 bp Feature: gene Location: 65969-67267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66188-66812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661 88-6681 2 bp Feature: domain Description: GIIM Note: maturase Location: 66854-67082 bp Feature: domain Description: GIIM Note: maturase Location: 66854-67082 bp Feature: gene Location: 67538-68980 bp Feature: domain Description: FhlA Location: 67550-68093 bp Feature: domain Description: FhlA Location: 67550-68093 bp Feature: domain Description: COG4585 Location: 68096-68963 bp Feature: domain Description: COG4585 Location: 68096-68963 bp Feature: gene Location: 68982-69629 bp Feature: domain Description: CitB Location: 68985-69612 bp Feature: domain Description: CitB Location: 68985-6961 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ProW (COG4176), PBP2_OpuAC_like (cd13639), RVT-GII, GIIM (pfam08388), FhlA (COG3604), COG4585 (Signal transduction histidine kinase ), CitB (TIGR02484)

Seq: KQ947394.1 Bacillus shacheensis strain HNA-14 genomic scaffold scaffold3, whole genome shotgun sequence (315894 bp)
Overview 1 RT 1: 252098-257643 bp Neighborhood of RT #1 [252098, 257643] ABG_transport YkvI RVT-GII Feature: gene Location: 252098-253633 bp Feature: domain Description: ABG_transport Location: 252137-253625 bp Feature: domain Description: ABG_transport Location: 2 52 137-2 5362 5 bp Feature: gene Location: 253720-255024 bp Feature: domain Description: YkvI Location: 253978-255007 bp Feature: domain Description: YkvI Location: 2 53978-2 55007 bp Feature: gene Location: 255298-256800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255592-256216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 55592 -2 562 16 bp Feature: gene Location: 256925-257317 bp Feature: gene Location: 257422-257643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABG_transport (pfam03806), YkvI (COG3949), RVT-GII

Seq: LLYY01000026.1 Bacillus shacheensis strain HNA-14 contig26, whole genome shotgun sequence (65146 bp)
Overview 1 RT 1: 58611-62772 bp Neighborhood of RT #1 [58611, 62819] RVT-GII GIIM FeS_assembly_P ParA GerD GerD Feature: gene Location: 58611-58760 bp Feature: gene Location: 59117-59266 bp Feature: gene Location: 59348-60676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59603-60296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59603 -60296 bp Feature: domain Description: GIIM Note: maturase Location: 60380-60590 bp Feature: domain Description: GIIM Note: maturase Location: 603 80-60590 bp Feature: gene Location: 60882-61937 bp Feature: domain Description: FeS_assembly_P Location: 60894-61053 bp Feature: domain Description: FeS_assembly_P Location: 60894-61053 bp Feature: domain Description: ParA Location: 61206-61917 bp Feature: domain Description: ParA Location: 61206-61917 bp Feature: gene Location: 62232-62819 bp Feature: domain Description: GerD Location: 62349-62436 bp Feature: domain Description: GerD Location: 623 49-6243 6 bp Feature: domain Description: GerD Location: 62436-62772 bp Feature: domain Description: GerD Location: 6243 6-62772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FeS_assembly_P (pfam01883), ParA (pfam10609), GerD (pfam17898)