myRT

myRT report for GCA_001497485.1_ASM149748v1

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Seq: LQGU01000004.1 Vibrio parahaemolyticus strain K23 Contig04, whole genome shotgun sequence (411922 bp)
Overview 1 RT 1: 233738-242084 bp Neighborhood of RT #1 [233738, 242746] sulfatase_rSAM LysR RVT-UG8 RVT-UG3 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 233738-234976 bp Ori: KUH62313.1 Feature: domain Description: sulfatase_rSAM Location: 233753-234893 bp Feature: domain Description: sulfatase_rSAM Location: 233753-234893 bp Feature: gene Location: 235112-236065 bp Ori: KUH62314.1 Feature: domain Description: LysR Location: 235124-235997 bp Feature: domain Description: LysR Location: 2351 24-235997 bp Feature: gene Location: 236367-238352 bp Ori: KUH62315.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 236901-237348 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 236901 -237348 bp Feature: gene Location: 238352-239587 bp Ori: KUH62316.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 238640-239111 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 238640-2391 1 1 bp Feature: gene Location: 239589-240194 bp Feature: gene Location: 241034-242746 bp Ori: KUH62318.1 Feature: domain Description: Resolvase Location: 241046-241490 bp Feature: domain Description: Resolvase Location: 241 046-241 490 bp Feature: domain Description: Recombinase Location: 241583-241859 bp Feature: domain Description: Recombinase Location: 241 583-241 859 bp Feature: domain Description: Zn_ribbon_recom Location: 241907-242084 bp Feature: domain Description: Zn_ribbon_recom Location: 241 907-242084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sulfatase_rSAM (TIGR03942), LysR (COG0583), RVT-UG8, RVT-UG3, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: LQGU01000021.1 Vibrio parahaemolyticus strain K23 Contig21, whole genome shotgun sequence (37828 bp)
Overview 1 RT 1: 13152-16317 bp Neighborhood of RT #1 [13152, 16317] TflA Acetyltransf_3 RVT-UG11 Feature: gene Location: 13152-13505 bp Ori: KUH59812.1 Feature: domain Description: TflA Location: 13167-13494 bp Feature: domain Description: TflA Location: 13167-13494 bp Feature: gene Location: 13641-14117 bp Ori: KUH59813.1 Feature: domain Description: Acetyltransf_3 Location: 13668-14085 bp Feature: domain Description: Acetyltransf_3 Location: 13668-14085 bp Feature: gene Location: 14264-15034 bp Ori: KUH59814.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14396-14846 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14396-14846 bp Feature: gene Location: 15569-15793 bp Feature: gene Location: 16006-16317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TflA (cd16362), Acetyltransf_3 (pfam13302), RVT-UG11