myRT

myRT report for GCA_001506075.1_ASM150607v1

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Seq: KQ947475.1 Vibrio sp. MEBiC08052 genomic scaffold scaffold00001, whole genome shotgun sequence (4067252 bp)
Overview 1 RT 1: 878226-884365 bp 2 RT 2: 3950021-3957539 bp Neighborhood of RT #1 [878226, 884382] PinE RVT-UG2 PRK04247 HsdS RMtype1_S_StySPI-TRD2-CR2_like RMtype1_S_StySPI-TRD2-CR2_like Neighborhood of RT #2 [3950021, 3957539] TIGR03986 CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III CRISPR_Cas2 Feature: gene Location: 878226-878354 bp Feature: gene Location: 878790-879377 bp Ori: KUJ00121.1 Feature: domain Description: PinE Location: 878799-879360 bp Feature: domain Description: PinE Location: 878799-879360 bp Feature: gene Location: 879689-880990 bp Ori: KUJ00122.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 879881-880694 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 879881 -880694 bp Feature: gene Location: 881612-882607 bp Ori: KUJ00123.1 Feature: domain Description: PRK04247 Location: 881795-881912 bp Feature: domain Description: PRK04247 Location: 881 795-881 91 2 bp Feature: gene Location: 882610-884382 bp Ori: KUJ00124.1 Feature: domain Description: HsdS Location: 882625-882859 bp Feature: domain Description: HsdS Location: 882625-882859 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 882925-883480 bp Feature: domain Description: RMtype1 _S_StySPI-TRD2-CR2_like Location: 882925-883480 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 883798-884365 bp Feature: domain Description: RMtype1 _S_StySPI-TRD2-CR2_like Location: 883798-884365 bp Feature: gene Location: 3950021-3952186 bp Ori: KUI97419.1 Feature: domain Description: TIGR03986 Location: 3950114-3952082 bp Feature: domain Description: TIGR03986 Location: 39501 1 4-3952082 bp Feature: gene Location: 3952195-3954255 bp Feature: gene Location: 3954308-3957094 bp Ori: KUI97421.1 Feature: domain Description: CRISPR_Cas6 Location: 3954731-3955127 bp Feature: domain Description: CRISPR_Cas6 Location: 3954731 -39551 27 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3955358-3955967 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3955358-3955967 bp Feature: domain Description: Cas1_I-II-III Location: 3956147-3957056 bp Feature: domain Description: Cas1 _I-II-III Location: 39561 47-3957056 bp Feature: gene Location: 3957110-3957415 bp Ori: KUI97422.1 Feature: domain Description: CRISPR_Cas2 Location: 3957125-3957290 bp Feature: domain Description: CRISPR_Cas2 Location: 39571 25-3957290 bp Feature: gene Location: 3957375-3957539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG2, PRK04247 (endonuclease NucS), HsdS (COG0732), RMtype1_S_StySPI-TRD2-CR2_like (cd17523), TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas2 (pfam09827)