myRT

myRT report for GCA_001507875.1_ASM150787v1

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Seq: LGEP01000007.1 Pseudomonas sp. 63_8 DS1215_scaffold_180, whole genome shotgun sequence (4342 bp)
Overview 1 RT 1: 255-4342 bp Neighborhood of RT #1 [255, 4342] DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 255-401 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 261-372 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 261 -372 bp Feature: gene Location: 581-2254 bp Feature: RT Description: RVT_N Location: 626-869 bp Feature: RT Description: RVT_N Location: 626-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 4-1 550 bp Feature: domain Description: GIIM Note: maturase Location: 1604-1835 bp Feature: domain Description: GIIM Note: maturase Location: 1 604-1 835 bp Feature: gene Location: 2810-4138 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2936-3155 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2936-31 55 bp Feature: domain Description: zf-IS66 Location: 3176-3302 bp Feature: domain Description: zf-IS66 Location: 31 76-3302 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3344-4118 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3344-41 1 8 bp Feature: gene Location: 4200-4342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)