myRT

myRT report for GCA_001508855.1_ASM150885v1

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Seq: LGFL01000106.1 Thermoanaerobacterales bacterium 50_218 S_scaffold_2957, whole genome shotgun sequence (2622 bp)
Overview 1 RT 1: 1-2622 bp Neighborhood of RT #1 [1, 2622] RVT-UG25 HEAT_2 DUF1848 Feature: gene Location: 1-450 bp Feature: gene Location: 492-2057 bp Ori: KUK30967.1 Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 576-960 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 576-960 bp Feature: domain Description: HEAT_2 Location: 1581-1758 bp Feature: domain Description: HEAT_2 Location: 1 581 -1 758 bp Feature: gene Location: 2190-2622 bp Ori: KUK30968.1 Feature: domain Description: DUF1848 Location: 2196-2622 bp Feature: domain Description: DUF1 848 Location: 21 96-2622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25, HEAT_2 (pfam13646), DUF1848 (pfam08902)

Seq: LGFL01000028.1 Thermoanaerobacterales bacterium 50_218 S_scaffold_190, whole genome shotgun sequence (19271 bp)
Overview 1 RT 1: 8227-14390 bp Neighborhood of RT #1 [8227, 14728] eRF1 SLH SLH SLH RVT-GII RVT-GII GIIM Methyltransf_11 Feature: gene Location: 8227-9387 bp Ori: KUK31656.1 Feature: domain Description: eRF1 Location: 8587-9385 bp Feature: domain Description: eRF1 Location: 8587-9385 bp Feature: gene Location: 9598-10590 bp Ori: KUK31657.1 Feature: domain Description: SLH Location: 9757-9880 bp Feature: domain Description: SLH Location: 9757-9880 bp Feature: domain Description: SLH Location: 10021-10099 bp Feature: domain Description: SLH Location: 1002 1-10099 bp Feature: domain Description: SLH Location: 10168-10297 bp Feature: domain Description: SLH Location: 10168-102 97 bp Feature: gene Location: 11367-11678 bp Ori: KUK31658.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11577-11676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11577-11676 bp Feature: gene Location: 11907-12635 bp Ori: KUK31659.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11910-12198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11910-12 198 bp Feature: domain Description: GIIM Note: maturase Location: 12240-12474 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 40-12 474 bp Feature: gene Location: 12959-13621 bp Feature: gene Location: 13985-14728 bp Ori: KUK31661.1 Feature: domain Description: Methyltransf_11 Location: 14114-14390 bp Feature: domain Description: Methyltransf_11 Location: 14114-14390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eRF1 (COG1503), SLH (pfam00395), RVT-GII, GIIM (pfam08388), Methyltransf_11 (pfam08241)

Seq: LGFL01000021.1 Thermoanaerobacterales bacterium 50_218 S_scaffold_146, whole genome shotgun sequence (22474 bp)
Overview 1 RT 1: 1-6509 bp Neighborhood of RT #1 [1, 6538] RVT-GII GIIM ZntA GAF_2 HDGYP Feature: gene Location: 1-70 bp Feature: gene Location: 595-1941 bp Ori: KUK31778.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1552 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1855 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1855 bp Feature: gene Location: 2414-4915 bp Ori: KUK31779.1 Feature: domain Description: ZntA Location: 2684-4880 bp Feature: domain Description: ZntA Location: 2684-4880 bp Feature: gene Location: 5519-6538 bp Ori: KUK31780.1 Feature: domain Description: GAF_2 Location: 5525-5912 bp Feature: domain Description: GAF_2 Location: 5525-5912 bp Feature: domain Description: HDGYP Location: 5918-6509 bp Feature: domain Description: HDGYP Location: 5918-6509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ZntA (COG2217), GAF_2 (pfam13185), HDGYP (COG2206)