myRT

myRT report for GCA_001510715.1_ASM151071v1

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Seq: LMTJ01000001.1 Bacillus sp. FJAT-29814 scaffold1, whole genome shotgun sequence (834141 bp)
Overview 1 RT 1: 195640-201045 bp Neighborhood of RT #1 [195640, 201317] TatD_DNAse COG4930 RVT-UG13 DUF1643 DEXXQc_DNA2 Peptidase_M78 Feature: gene Location: 195640-196371 bp Feature: domain Description: TatD_DNAse Location: 195649-196348 bp Feature: domain Description: TatD_DNAse Location: 1 95649-1 96348 bp Feature: gene Location: 196761-197264 bp Feature: domain Description: COG4930 Location: 196770-197259 bp Feature: domain Description: COG4930 Location: 1 96770-1 97259 bp Feature: gene Location: 197372-198079 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 197795-197930 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 97795-1 97930 bp Feature: gene Location: 198156-198785 bp Feature: domain Description: DUF1643 Location: 198264-198732 bp Feature: domain Description: DUF1 643 Location: 1 98264-1 98732 bp Feature: gene Location: 198960-201317 bp Feature: domain Description: DEXXQc_DNA2 Location: 199428-199653 bp Feature: domain Description: DEXXQc_DNA2 Location: 1 99428-1 99653 bp Feature: domain Description: Peptidase_M78 Location: 200928-201045 bp Feature: domain Description: Peptidase_M78 Location: 200928-201 045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TatD_DNAse (cd01310), COG4930 (Predicted ATP-dependent Lon-type protease ), RVT-UG13, DUF1643 (pfam07799), DEXXQc_DNA2 (cd18041), Peptidase_M78 (pfam06114)

Seq: LMTJ01000002.1 Bacillus sp. FJAT-29814 scaffold2, whole genome shotgun sequence (794481 bp)
Overview 1 RT 1: 709845-714880 bp Neighborhood of RT #1 [709845, 714880] GsiB KGG GsiB DUF212 RVT-GII GIIM RVT-GII Feature: gene Location: 709845-710237 bp Feature: domain Description: GsiB Location: 709860-709980 bp Feature: domain Description: GsiB Location: 709860-709980 bp Feature: domain Description: KGG Location: 709986-710037 bp Feature: domain Description: KGG Location: 709986-710037 bp Feature: domain Description: GsiB Location: 710094-710214 bp Feature: domain Description: GsiB Location: 710094-7102 14 bp Feature: gene Location: 710484-710954 bp Feature: domain Description: DUF212 Location: 710502-710922 bp Feature: domain Description: DUF2 12 Location: 710502 -71092 2 bp Feature: gene Location: 711228-711962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 711234-711519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7112 34-711519 bp Feature: domain Description: GIIM Note: maturase Location: 711567-711774 bp Feature: domain Description: GIIM Note: maturase Location: 711567-711774 bp Feature: gene Location: 711931-712557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712252-712501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 2 52 -712 501 bp Feature: gene Location: 712745-713056 bp Feature: gene Location: 713168-714880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GsiB (COG3729), KGG (pfam10685), DUF212 (pfam02681), RVT-GII, GIIM (pfam08388)

Seq: LMTJ01000021.1 Bacillus sp. FJAT-29814 scaffold21, whole genome shotgun sequence (13877 bp)
Overview 1 RT 1: 3316-7006 bp Neighborhood of RT #1 [3316, 7006] RVT-GII GIIM Sig70_famx3 Feature: gene Location: 3316-4470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3397-4090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 97-4090 bp Feature: domain Description: GIIM Note: maturase Location: 4180-4378 bp Feature: domain Description: GIIM Note: maturase Location: 4180-43 78 bp Feature: gene Location: 5848-6372 bp Feature: domain Description: Sig70_famx3 Location: 5860-6349 bp Feature: domain Description: Sig70_famx3 Location: 5860-63 49 bp Feature: gene Location: 6362-7006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Sig70_famx3 (TIGR02954)

Seq: LMTJ01000003.1 Bacillus sp. FJAT-29814 scaffold3, whole genome shotgun sequence (534926 bp)
Overview 1 RT 1: 30831-33975 bp Neighborhood of RT #1 [30831, 33975] RVT-GII RVT-GII GIIM Feature: gene Location: 30831-31040 bp Feature: gene Location: 32056-32232 bp Feature: gene Location: 32237-32770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32435-32765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324 35-32765 bp Feature: gene Location: 32950-33261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32953-33055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32953-33055 bp Feature: domain Description: GIIM Note: maturase Location: 33103-33232 bp Feature: domain Description: GIIM Note: maturase Location: 33103-33232 bp Feature: gene Location: 33276-33497 bp Feature: gene Location: 33835-33975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LMTJ01000009.1 Bacillus sp. FJAT-29814 scaffold9, whole genome shotgun sequence (171213 bp)
Overview 1 RT 1: 105358-109954 bp Neighborhood of RT #1 [105358, 109954] PrsW RVT-GII GIIM Feature: gene Location: 105358-105984 bp Feature: gene Location: 106149-107228 bp Feature: domain Description: PrsW Location: 106374-107169 bp Feature: domain Description: PrsW Location: 106374-107169 bp Feature: gene Location: 107698-109083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108019-108640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108019-108640 bp Feature: domain Description: GIIM Note: maturase Location: 108688-108895 bp Feature: domain Description: GIIM Note: maturase Location: 108688-108895 bp Feature: gene Location: 109361-109708 bp Feature: gene Location: 109760-109954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrsW (COG2339), RVT-GII, GIIM (pfam08388)