myRT

myRT report for GCA_001514035.1_ASM151403v1

Download annotations/find similar RTs

Seq: KQ948244.1 Streptomyces yokosukanensis strain DSM 40224 genomic scaffold PRJNA299221_s039, whole genome shotgun sequence (36075 bp)
Overview 1 RT 1: 10517-17891 bp 2 RT 2: 33314-36075 bp Neighborhood of RT #1 [10517, 18757] HTH_32 DEDD_Tnp_IS110 Transposase_20 RVT-GII GIIM HTH_23 HTH_33 COG5305 Neighborhood of RT #2 [33314, 36075] LexA_DNA_bind RVT-GII GIIM Feature: gene Location: 10517-11107 bp Feature: domain Description: HTH_32 Location: 10646-10859 bp Feature: domain Description: HTH_32 Location: 1 0646-1 0859 bp Feature: gene Location: 12473-13693 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 12521-12983 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 2521 -1 2983 bp Feature: domain Description: Transposase_20 Location: 13301-13556 bp Feature: domain Description: Transposase_20 Location: 1 3301 -1 3556 bp Feature: gene Location: 13914-15170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14130-14790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 30-1 4790 bp Feature: domain Description: GIIM Note: maturase Location: 14868-15090 bp Feature: domain Description: GIIM Note: maturase Location: 1 4868-1 5090 bp Feature: gene Location: 16536-16989 bp Feature: domain Description: HTH_23 Location: 16542-16662 bp Feature: domain Description: HTH_23 Location: 1 6542-1 6662 bp Feature: domain Description: HTH_33 Location: 16767-16941 bp Feature: domain Description: HTH_33 Location: 1 6767-1 6941 bp Feature: gene Location: 17282-18757 bp Feature: domain Description: COG5305 Location: 17345-17891 bp Feature: domain Description: COG5305 Location: 1 7345-1 7891 bp Feature: gene Location: 33314-33520 bp Feature: gene Location: 33517-33735 bp Feature: domain Description: LexA_DNA_bind Location: 33532-33721 bp Feature: domain Description: LexA_DNA_bind Location: 33532-33721 bp Feature: gene Location: 33812-35092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34028-34688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34028-34688 bp Feature: domain Description: GIIM Note: maturase Location: 34769-35003 bp Feature: domain Description: GIIM Note: maturase Location: 34769-35003 bp Feature: gene Location: 35756-36075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), HTH_33 (pfam13592), COG5305 (Uncharacterized membrane protein ), LexA_DNA_bind (pfam01726)