myRT

myRT report for GCA_001514305.1_ASM151430v1

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Seq: KQ949076.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s002, whole genome shotgun sequence (692720 bp)
Overview 1 RT 1: 662421-669821 bp Neighborhood of RT #1 [662421, 669821] HomoserineK_II MdlB RVT-GII GIIM AdoMet_MTases Feature: gene Location: 662421-663467 bp Ori: KUO22152.1 Feature: domain Description: HomoserineK_II Location: 662472-663378 bp Feature: domain Description: HomoserineK_II Location: 662472-663378 bp Feature: gene Location: 663727-665646 bp Ori: KUO22198.1 Feature: domain Description: MdlB Location: 663874-665608 bp Feature: domain Description: MdlB Location: 663874-665608 bp Feature: gene Location: 666288-667718 bp Ori: KUO22199.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666609-667293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666609-667293 bp Feature: domain Description: GIIM Note: maturase Location: 667362-667596 bp Feature: domain Description: GIIM Note: maturase Location: 667362-667596 bp Feature: gene Location: 667874-668374 bp Ori: KUO22200.1 Feature: domain Description: AdoMet_MTases Location: 667940-668234 bp Feature: domain Description: AdoMet_MTases Location: 667940-668234 bp Feature: gene Location: 668853-669821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HomoserineK_II (cd05153), MdlB (COG1132), RVT-GII, GIIM (pfam08388), AdoMet_MTases (cl17173)

Seq: KQ949170.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s096, whole genome shotgun sequence (2566 bp)
Overview 1 RT 1: 112-1849 bp Neighborhood of RT #1 [112, 1872] RVT_N RVT-GII GIIM HNH Feature: gene Location: 112-1872 bp Ori: KUO11206.1 Feature: domain Description: RVT_N Location: 184-427 bp Feature: domain Description: RVT_N Location: 184-42 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1138 bp Feature: domain Description: GIIM Note: maturase Location: 1195-1423 bp Feature: domain Description: GIIM Note: maturase Location: 1195-142 3 bp Feature: domain Description: HNH Note: nucleases Location: 1747-1849 bp Feature: domain Description: HNH Note: nucleases Location: 1747-1849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: KQ949078.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s004, whole genome shotgun sequence (439511 bp)
Overview 1 RT 1: 384397-391509 bp Neighborhood of RT #1 [384397, 391625] Lactonase Lactonase RVT-GII GIIM PHA02517 ACAD Feature: gene Location: 384397-385560 bp Ori: KUO21358.1 Feature: domain Description: Lactonase Location: 384535-385237 bp Feature: domain Description: Lactonase Location: 3 8453 5-3 8523 7 bp Feature: domain Description: Lactonase Location: 385258-385504 bp Feature: domain Description: Lactonase Location: 3 85258-3 85504 bp Feature: gene Location: 385771-386022 bp Feature: gene Location: 387313-388740 bp Ori: KUO21317.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387634-388318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8763 4-3 883 18 bp Feature: domain Description: GIIM Note: maturase Location: 388390-388618 bp Feature: domain Description: GIIM Note: maturase Location: 3 883 90-3 88618 bp Feature: gene Location: 389049-389810 bp Ori: KUO21359.1 Feature: domain Description: PHA02517 Location: 389055-389763 bp Feature: domain Description: PHA02517 Location: 3 89055-3 89763 bp Feature: gene Location: 390390-391625 bp Ori: KUO21318.1 Feature: domain Description: ACAD Location: 390420-391509 bp Feature: domain Description: ACAD Location: 3 90420-3 91509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lactonase (pfam10282), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), ACAD (cl09933)

Seq: KQ949099.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s025, whole genome shotgun sequence (158391 bp)
Overview 1 RT 1: 1-4780 bp Neighborhood of RT #1 [1, 4806] DDE_3 RVT_N RVT-GII GIIM PRK12554 Feature: gene Location: 1-483 bp Feature: domain Description: DDE_3 Location: 121-484 bp Feature: domain Description: DDE_3 Location: 121-4 84 bp Feature: gene Location: 1161-2944 bp Ori: KUO17257.1 Feature: domain Description: RVT_N Location: 1248-1485 bp Feature: domain Description: RVT_N Location: 124 8-14 85 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1545-2202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 5-2202 bp Feature: domain Description: GIIM Note: maturase Location: 2256-2487 bp Feature: domain Description: GIIM Note: maturase Location: 2256-24 87 bp Feature: gene Location: 3573-3785 bp Feature: gene Location: 3931-4806 bp Ori: KUO17238.1 Feature: domain Description: PRK12554 Location: 3934-4780 bp Feature: domain Description: PRK12554 Location: 3934 -4 780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK12554 (undecaprenyl pyrophosphate phosphatase; Reviewed)

Seq: KQ949171.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s097, whole genome shotgun sequence (2559 bp)
Overview 1 RT 1: 118-1393 bp Neighborhood of RT #1 [118, 1830] RVT_N RVT-GII GIIM Feature: gene Location: 118-1830 bp Ori: KUO11203.1 Feature: domain Description: RVT_N Location: 154-391 bp Feature: domain Description: RVT_N Location: 15 4-391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45 1-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1162-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1162-1393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: KQ949107.1 Streptomyces sp. RV15 genomic scaffold PRJNA299236_s033, whole genome shotgun sequence (129264 bp)
Overview 1 RT 1: 51344-57063 bp Neighborhood of RT #1 [51344, 57110] DUF4978 RicinB_lectin_2 RicinB_lectin_2 RVT-GII PHA02517 Sigma70_r4 Sigma70_r4 Feature: gene Location: 51344-54643 bp Ori: KUO16207.1 Feature: domain Description: DUF4978 Location: 52787-53237 bp Feature: domain Description: DUF4978 Location: 52787-53237 bp Feature: domain Description: RicinB_lectin_2 Location: 54257-54467 bp Feature: domain Description: RicinB_lectin_2 Location: 54257-5446 7 bp Feature: domain Description: RicinB_lectin_2 Location: 54485-54641 bp Feature: domain Description: RicinB_lectin_2 Location: 54485-546 41 bp Feature: gene Location: 54868-55974 bp Feature: gene Location: 55993-56187 bp Ori: KUO16209.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55996-56131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55996 -56 131 bp Feature: gene Location: 56382-56606 bp Ori: KUO16274.1 Feature: domain Description: PHA02517 Location: 56394-56559 bp Feature: domain Description: PHA02517 Location: 56 394-56 559 bp Feature: gene Location: 56556-57110 bp Ori: KUO16210.1 Feature: domain Description: Sigma70_r4 Location: 56748-56868 bp Feature: domain Description: Sigma70_r4 Location: 56 748-56 86 8 bp Feature: domain Description: Sigma70_r4 Location: 56955-57063 bp Feature: domain Description: Sigma70_r4 Location: 56 955-5706 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4978 (pfam16349), RicinB_lectin_2 (pfam14200), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), Sigma70_r4 (pfam04545)