myRT

myRT report for GCA_001514495.1_ASM151449v1

Download annotations/find similar RTs

Seq: BCNM01000010.1 Paenibacillus pabuli NBRC 13638 DNA, contig: PPA03S_CON00010, whole genome shotgun sequence (252857 bp)
Overview 1 RT 1: 175933-181869 bp Neighborhood of RT #1 [175933, 181943] HTH_26 RVT-GII RVT-GII GIIM DapF Methyltransf_31 Feature: gene Location: 175933-176202 bp Feature: gene Location: 177003-178391 bp Feature: domain Description: HTH_26 Location: 177060-177225 bp Feature: domain Description: HTH_26 Location: 1 77060-1 77225 bp Feature: gene Location: 178783-179142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179026-179134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 79026-1 791 34 bp Feature: gene Location: 179228-179833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179234-179402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 79234-1 79402 bp Feature: domain Description: GIIM Note: maturase Location: 179459-179666 bp Feature: domain Description: GIIM Note: maturase Location: 1 79459-1 79666 bp Feature: gene Location: 180288-181121 bp Feature: domain Description: DapF Location: 180303-181110 bp Feature: domain Description: DapF Location: 1 80303-1 81 1 1 0 bp Feature: gene Location: 181149-181943 bp Feature: domain Description: Methyltransf_31 Location: 181572-181869 bp Feature: domain Description: Methyltransf_31 Location: 1 81 572-1 81 869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_26 (pfam13443), RVT-GII, GIIM (pfam08388), DapF (TIGR00652), Methyltransf_31 (pfam13847)

Seq: BCNM01000024.1 Paenibacillus pabuli NBRC 13638 DNA, contig: PPA03S_CON00024, whole genome shotgun sequence (126894 bp)
Overview 1 RT 1: 108375-114726 bp Neighborhood of RT #1 [108375, 114842] SpoVK Peptidases_S8_Subtilisin_like_2 RVT-UG2 HTH_XRE TPR TPR Feature: gene Location: 108375-109340 bp Feature: domain Description: SpoVK Location: 108645-109290 bp Feature: domain Description: SpoVK Location: 108645-1092 90 bp Feature: gene Location: 109357-111801 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 110185-111079 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 110185-111079 bp Feature: gene Location: 112084-113412 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 112300-113116 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 112 300-113116 bp Feature: gene Location: 113463-113723 bp Feature: domain Description: HTH_XRE Location: 113475-113568 bp Feature: domain Description: HTH_XRE Location: 113475-113568 bp Feature: gene Location: 114039-114842 bp Feature: domain Description: TPR Location: 114267-114327 bp Feature: domain Description: TPR Location: 1142 67-11432 7 bp Feature: domain Description: TPR Location: 114639-114726 bp Feature: domain Description: TPR Location: 114639-11472 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVK (COG0464), Peptidases_S8_Subtilisin_like_2 (cd04847), RVT-UG2, HTH_XRE (smart00530), TPR (smart00028)