myRT

myRT report for GCA_001514705.1_ASM151470v1

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Seq: BBVL01000027.1 Escherichia albertii DNA, contig: NIAH_Bird_23contig0027, strain: NIAH_Bird_23, whole genome shotgun sequence (43317 bp)
Overview 1 RT 1: 40532-43052 bp Neighborhood of RT #1 [40532, 43052] RhsA YhhI YhhI RVT-GII GIIM Feature: gene Location: 40532-40714 bp Feature: domain Description: RhsA Location: 40535-40700 bp Feature: domain Description: RhsA Location: 40535-40700 bp Feature: gene Location: 40725-41474 bp Feature: domain Description: YhhI Location: 40791-41115 bp Feature: domain Description: YhhI Location: 40791 -41 1 1 5 bp Feature: domain Description: YhhI Location: 41136-41376 bp Feature: domain Description: YhhI Location: 41 1 36-41 376 bp Feature: gene Location: 41485-42840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41767-42451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 767-42451 bp Feature: domain Description: GIIM Note: maturase Location: 42532-42754 bp Feature: domain Description: GIIM Note: maturase Location: 42532-42754 bp Feature: gene Location: 42846-43052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: BBVL01000049.1 Escherichia albertii DNA, contig: NIAH_Bird_23contig0049, strain: NIAH_Bird_23, whole genome shotgun sequence (9452 bp)
Overview 1 RT 1: 4340-7742 bp Neighborhood of RT #1 [4340, 7742] DUF4942 RVT-GII GIIM Feature: gene Location: 4340-5191 bp Feature: domain Description: DUF4942 Location: 4613-5168 bp Feature: domain Description: DUF4942 Location: 4613-5168 bp Feature: gene Location: 5193-5420 bp Feature: gene Location: 5517-6854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5820-6453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582 0-6453 bp Feature: domain Description: GIIM Note: maturase Location: 6525-6747 bp Feature: domain Description: GIIM Note: maturase Location: 652 5-6747 bp Feature: gene Location: 7204-7344 bp Feature: gene Location: 7428-7742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4942 (pfam13708), RVT-GII, GIIM (pfam08388)