myRT

myRT report for GCA_001514845.1_ASM151484v1

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Seq: BBVS01000014.1 Escherichia albertii DNA, contig: CB9791contig0014, strain: CB9791, whole genome shotgun sequence (111771 bp)
Overview 1 RT 1: 3-4424 bp Neighborhood of RT #1 [3, 4474] DDE_Tnp_IS66 RVT-GII GIIM HTH_23 DUF4007 Feature: gene Location: 3-998 bp Feature: domain Description: DDE_Tnp_IS66 Location: 120-957 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 20-957 bp Feature: gene Location: 1460-2692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1664-2315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 664-231 5 bp Feature: domain Description: GIIM Note: maturase Location: 2393-2615 bp Feature: domain Description: GIIM Note: maturase Location: 2393-261 5 bp Feature: gene Location: 2958-3311 bp Feature: domain Description: HTH_23 Location: 3030-3114 bp Feature: domain Description: HTH_23 Location: 3030-31 1 4 bp Feature: gene Location: 3524-4474 bp Feature: domain Description: DUF4007 Location: 3566-4424 bp Feature: domain Description: DUF4007 Location: 3566-4424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), DUF4007 (pfam13182), DDE_Tnp_IS66 (pfam03050)

Seq: BBVS01000031.1 Escherichia albertii DNA, contig: CB9791contig0031, strain: CB9791, whole genome shotgun sequence (39980 bp)
Overview 1 RT 1: 7082-9502 bp Neighborhood of RT #1 [7082, 9502] RelE InsQ RVT-GII GIIM Feature: gene Location: 7082-7369 bp Feature: domain Description: RelE Location: 7085-7343 bp Feature: domain Description: RelE Location: 7085-7343 bp Feature: gene Location: 7575-7784 bp Feature: domain Description: InsQ Location: 7614-7782 bp Feature: domain Description: InsQ Location: 7614-7782 bp Feature: gene Location: 8111-8455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8432 bp Feature: gene Location: 8714-9040 bp Feature: domain Description: GIIM Note: maturase Location: 8738-8945 bp Feature: domain Description: GIIM Note: maturase Location: 8738-8945 bp Feature: gene Location: 9245-9502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), InsQ (COG0675), RVT-GII, GIIM (pfam08388)