myRT

myRT report for GCA_001515005.1_ASM151500v1

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Seq: BBWA01000018.1 Escherichia albertii DNA, contig: K7394contig0018, strain: K7394, whole genome shotgun sequence (35136 bp)
Overview 1 RT 1: 31586-34898 bp Neighborhood of RT #1 [31586, 34969] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C GIIM HNHc RVT_N RVT-GII Feature: gene Location: 31586-33157 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31724-31949 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31 724-31 949 bp Feature: domain Description: zf-IS66 Location: 31970-32102 bp Feature: domain Description: zf-IS66 Location: 31 970-321 02 bp Feature: domain Description: DDE_Tnp_IS66 Location: 32147-33002 bp Feature: domain Description: DDE_Tnp_IS66 Location: 321 47-33002 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 33023-33134 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 33023-331 34 bp Feature: gene Location: 33300-33809 bp Feature: domain Description: GIIM Note: maturase Location: 33303-33402 bp Feature: domain Description: GIIM Note: maturase Location: 33303-33402 bp Feature: domain Description: HNHc Note: nucleases Location: 33615-33774 bp Feature: domain Description: HNHc Note: nucleases Location: 3361 5-33774 bp Feature: gene Location: 33920-34969 bp Feature: RT Description: RVT_N Location: 33968-34211 bp Feature: RT Description: RVT_N Location: 33968-3421 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34256-34898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34256-34898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), RVT-GII

Seq: BBWA01000025.1 Escherichia albertii DNA, contig: K7394contig0025, strain: K7394, whole genome shotgun sequence (2232 bp)
Overview 1 RT 1: 2-2232 bp Neighborhood of RT #1 [2, 2231] RVT-GII GIIM YhhI Feature: gene Location: 2-160 bp Feature: gene Location: 692-2047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1658 bp Feature: domain Description: GIIM Note: maturase Location: 1739-1961 bp Feature: domain Description: GIIM Note: maturase Location: 1739-1961 bp Feature: gene Location: 2058-2231 bp Feature: domain Description: YhhI Location: 2124-2232 bp Feature: domain Description: YhhI Location: 2 12 4-2 2 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)