myRT

myRT report for GCA_001515945.1_41k

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Seq: LOER01000006.1 Desulfitibacter sp. BRH_c19 BRHa_1000483, whole genome shotgun sequence (50319 bp)
Overview 1 RT 1: 42660-47722 bp Neighborhood of RT #1 [42660, 47722] PemK_toxin AmpC RVT-GII DUF3795 Feature: gene Location: 42660-43001 bp Ori: KUO53154.1 Feature: domain Description: PemK_toxin Location: 42678-42990 bp Feature: domain Description: PemK_toxin Location: 42678-42990 bp Feature: gene Location: 43195-44268 bp Ori: KUO53155.1 Feature: domain Description: AmpC Location: 43228-44191 bp Feature: domain Description: AmpC Location: 43228-441 91 bp Feature: gene Location: 44528-45889 bp Ori: KUO53156.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44834-45524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44834-45524 bp Feature: gene Location: 46448-47008 bp Ori: KUO53157.1 Feature: domain Description: DUF3795 Location: 46472-46655 bp Feature: domain Description: DUF3795 Location: 46472-46655 bp Feature: gene Location: 47285-47722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PemK_toxin (pfam02452), AmpC (COG1680), RVT-GII, DUF3795 (pfam12675)

Seq: LOER01000020.1 Desulfitibacter sp. BRH_c19 BRHa_1003217, whole genome shotgun sequence (8082 bp)
Overview 1 RT 1: 3219-5683 bp Neighborhood of RT #1 [3219, 5703] Acetyltransf_1 RVT-GII GIIM DUF4829 Feature: gene Location: 3219-3710 bp Ori: KUO51852.1 Feature: domain Description: Acetyltransf_1 Location: 3348-3627 bp Feature: domain Description: Acetyltransf_1 Location: 3348-362 7 bp Feature: gene Location: 3801-4034 bp Feature: gene Location: 4024-4593 bp Ori: KUO51854.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4057-4228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4057-42 2 8 bp Feature: domain Description: GIIM Note: maturase Location: 4297-4522 bp Feature: domain Description: GIIM Note: maturase Location: 42 97-452 2 bp Feature: gene Location: 4575-4931 bp Feature: gene Location: 5119-5703 bp Ori: KUO51856.1 Feature: domain Description: DUF4829 Location: 5329-5683 bp Feature: domain Description: DUF482 9 Location: 532 9-5683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, GIIM (pfam08388), DUF4829 (pfam16111)