myRT

myRT report for GCA_001517845.1_ASM151784v1

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Seq: LRAF01000003.1 Vibrio cholerae O1 biovar El Tor strain M1275 contig00003, whole genome shotgun sequence (355924 bp)
Overview 1 RT 1: 123221-128456 bp Neighborhood of RT #1 [123221, 128482] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123221-123838 bp Ori: KUP89565.1 Feature: domain Description: TIGR02646 Location: 123332-123716 bp Feature: domain Description: TIGR02646 Location: 1 23332-1 2371 6 bp Feature: gene Location: 123851-125473 bp Ori: KUP89566.1 Feature: domain Description: COG3950 Location: 124037-125468 bp Feature: domain Description: COG3950 Location: 1 24037-1 25468 bp Feature: gene Location: 125474-126421 bp Ori: KUP89752.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125588-126185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25588-1 261 85 bp Feature: gene Location: 126907-127692 bp Ori: KUP89567.1 Feature: domain Description: PRK10621 Location: 126916-127687 bp Feature: domain Description: PRK1 0621 Location: 1 2691 6-1 27687 bp Feature: gene Location: 127622-128482 bp Ori: KUP89568.1 Feature: domain Description: LysR Location: 127628-128456 bp Feature: domain Description: LysR Location: 1 27628-1 28456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)