myRT

myRT report for GCA_001518065.1_ASM151806v1

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Seq: LRCD01000063.1 Enterobacter hormaechei subsp. steigerwaltii strain GN03193 GCID_ENTE_00231_NODE_155.ctg_1, whole genome shotgun sequence (8343 bp)
Overview 1 RT 1: 1-6234 bp Neighborhood of RT #1 [1, 6248] UvrA UvrA PHA02517 RVT-GII GIIM PHA02517 fghA_ester_D Feature: gene Location: 1-1192 bp Feature: domain Description: UvrA Location: 49-397 bp Feature: domain Description: UvrA Location: 49-397 bp Feature: domain Description: UvrA Location: 427-994 bp Feature: domain Description: UvrA Location: 427-994 bp Feature: gene Location: 1826-2036 bp Feature: domain Description: PHA02517 Location: 1829-1934 bp Feature: domain Description: PHA0251 7 Location: 1 829-1 934 bp Feature: gene Location: 2363-3871 bp Ori: KUQ30894.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2621-3353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2621 -3353 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3626 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3626 bp Feature: gene Location: 4478-4903 bp Ori: KUQ30889.1 Feature: domain Description: PHA02517 Location: 4499-4838 bp Feature: domain Description: PHA0251 7 Location: 4499-4838 bp Feature: gene Location: 5412-6248 bp Ori: KUQ30890.1 Feature: domain Description: fghA_ester_D Location: 5418-6234 bp Feature: domain Description: fghA_ester_D Location: 541 8-6234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fghA_ester_D (TIGR02821)

Seq: LRCD01000090.1 Enterobacter hormaechei subsp. steigerwaltii strain GN03193 GCID_ENTE_00231_NODE_18.ctg_1, whole genome shotgun sequence (67244 bp)
Overview 1 RT 1: 409-7755 bp Neighborhood of RT #1 [409, 7763] COG4643 COG5519 Ogr_Delta RVT-Retrons PRK09692 Feature: gene Location: 409-3096 bp Ori: KUQ29354.1 Feature: domain Description: COG4643 Location: 421-1357 bp Feature: domain Description: COG4643 Location: 42 1-1357 bp Feature: domain Description: COG5519 Location: 1414-3082 bp Feature: domain Description: COG5519 Location: 1414-3082 bp Feature: gene Location: 3374-3646 bp Ori: KUQ29355.1 Feature: domain Description: Ogr_Delta Location: 3398-3533 bp Feature: domain Description: Ogr_Delta Location: 3398-3533 bp Feature: gene Location: 4370-5554 bp Ori: KUQ29356.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4520-5099 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 452 0-5099 bp Feature: gene Location: 5554-6594 bp Feature: gene Location: 6597-7763 bp Ori: KUQ29413.1 Feature: domain Description: PRK09692 Location: 6606-7755 bp Feature: domain Description: PRK09692 Location: 6606-7755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family ), Ogr_Delta (pfam04606), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: LRCD01000025.1 Enterobacter hormaechei subsp. steigerwaltii strain GN03193 GCID_ENTE_00231_NODE_120.ctg_1, whole genome shotgun sequence (12101 bp)
Overview 1 RT 1: 6653-11624 bp Neighborhood of RT #1 [6653, 11624] AdoMet_MTases RVT-UG17 SLATT_5 Feature: gene Location: 6653-7399 bp Ori: KUQ33156.1 Feature: domain Description: AdoMet_MTases Location: 6770-7280 bp Feature: domain Description: AdoMet_MTases Location: 6770-7280 bp Feature: gene Location: 7864-8415 bp Feature: gene Location: 8666-10036 bp Ori: KUQ33158.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8894-9500 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8894-9500 bp Feature: gene Location: 10026-10565 bp Ori: KUQ33159.1 Feature: domain Description: SLATT_5 Location: 10032-10545 bp Feature: domain Description: SLATT_5 Location: 1003 2-10545 bp Feature: gene Location: 11235-11624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT-UG17, SLATT_5 (pfam18160)

Seq: LRCD01000156.1 Enterobacter hormaechei subsp. steigerwaltii strain GN03193 GCID_ENTE_00231_NODE_24.ctg_1, whole genome shotgun sequence (61047 bp)
Overview 1 RT 1: 2710-10702 bp Neighborhood of RT #1 [2710, 10713] COG5301 COG5301 Caudo_TAP RVT-Retrons AAA_15 FI Feature: gene Location: 2710-4587 bp Ori: KUQ25013.1 Feature: domain Description: COG5301 Location: 2713-3631 bp Feature: domain Description: COG5301 Location: 2713-3631 bp Feature: domain Description: COG5301 Location: 3943-4366 bp Feature: domain Description: COG5301 Location: 394 3-4 366 bp Feature: gene Location: 4591-5118 bp Ori: KUQ25014.1 Feature: domain Description: Caudo_TAP Location: 4711-5116 bp Feature: domain Description: Caudo_TAP Location: 4 711-5116 bp Feature: gene Location: 5541-6638 bp Ori: KUQ25015.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5715-6258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5715-6258 bp Feature: gene Location: 6759-9023 bp Ori: KUQ25016.1 Feature: domain Description: AAA_15 Location: 6762-7785 bp Feature: domain Description: AAA_15 Location: 6762-7785 bp Feature: gene Location: 9523-10713 bp Ori: KUQ25017.1 Feature: domain Description: FI Location: 9526-10702 bp Feature: domain Description: FI Location: 9526-10702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5301 (Phage-related tail fibre protein ), Caudo_TAP (pfam02413), RVT-Retrons, AAA_15 (pfam13175), FI (PHA02560)