myRT

myRT report for GCA_001518285.1_ASM151828v1

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Seq: LRCJ01000064.1 Enterobacter asburiae strain GN03667 GCID_ENTE_00237_NODE_62.ctg_1, whole genome shotgun sequence (21160 bp)
Overview 1 RT 1: 5247-10718 bp Neighborhood of RT #1 [5247, 10726] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 5247-5909 bp Ori: KUQ47882.1 Feature: domain Description: Plasmid_stab_B Location: 5262-5469 bp Feature: domain Description: Plasmid_stab_B Location: 5262-5469 bp Feature: domain Description: Plasmid_stab_B Location: 5574-5778 bp Feature: domain Description: Plasmid_stab_B Location: 5574-5778 bp Feature: gene Location: 5912-6886 bp Ori: KUQ47883.1 Feature: domain Description: StbA Location: 5918-6863 bp Feature: domain Description: StbA Location: 591 8-6863 bp Feature: gene Location: 7132-8616 bp Ori: KUQ47884.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7534-8224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7534-8224 bp Feature: gene Location: 9024-9455 bp Ori: KUQ47885.1 Feature: domain Description: PRK10276 Location: 9075-9438 bp Feature: domain Description: PRK1 0276 Location: 9075-9438 bp Feature: gene Location: 9455-10726 bp Ori: KUQ47886.1 Feature: domain Description: umuC Location: 9458-10718 bp Feature: domain Description: umuC Location: 9458-1 071 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: LRCJ01000021.1 Enterobacter asburiae strain GN03667 GCID_ENTE_00237_NODE_23.ctg_1, whole genome shotgun sequence (80880 bp)
Overview 1 RT 1: 56335-61359 bp 2 RT 2: 69672-74554 bp Neighborhood of RT #1 [56335, 61359] HTH_XRE ImmA RVT-Retrons COG3950 Neighborhood of RT #2 [69672, 74703] CbeA_antitoxin CbtA_toxin RVT-UG3 RVT-UG8 HicB SymE_toxin Feature: gene Location: 56335-57423 bp Ori: KUQ51895.1 Feature: domain Description: HTH_XRE Location: 56386-56542 bp Feature: domain Description: HTH_XRE Location: 56386-56542 bp Feature: domain Description: ImmA Location: 56749-57280 bp Feature: domain Description: ImmA Location: 56749-572 80 bp Feature: gene Location: 57407-58033 bp Feature: gene Location: 58481-59497 bp Ori: KUQ51897.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58658-59255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58658-592 55 bp Feature: gene Location: 59497-61140 bp Ori: KUQ51898.1 Feature: domain Description: COG3950 Location: 59704-61033 bp Feature: domain Description: COG3950 Location: 59704-61033 bp Feature: gene Location: 61162-61359 bp Feature: gene Location: 69672-69998 bp Ori: KUQ51908.1 Feature: domain Description: CbeA_antitoxin Location: 69693-69993 bp Feature: domain Description: CbeA_antitoxin Location: 69693-69993 bp Feature: gene Location: 70019-70339 bp Ori: KUQ51909.1 Feature: domain Description: CbtA_toxin Location: 70022-70313 bp Feature: domain Description: CbtA_toxin Location: 7002 2 -70313 bp Feature: gene Location: 71102-71833 bp Ori: KUQ51910.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 71105-71396 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 71105-71396 bp Feature: gene Location: 71834-73801 bp Ori: KUQ51911.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 72341-72779 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 72 341-72 779 bp Feature: gene Location: 74078-74260 bp Ori: KUQ51912.1 Feature: domain Description: HicB Location: 74102-74216 bp Feature: domain Description: HicB Location: 74102 -742 16 bp Feature: gene Location: 74362-74703 bp Ori: KUQ51913.1 Feature: domain Description: SymE_toxin Location: 74413-74554 bp Feature: domain Description: SymE_toxin Location: 74413-74554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), ImmA (COG2856), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), CbeA_antitoxin (pfam06154), CbtA_toxin (pfam06755), RVT-UG3, RVT-UG8, HicB (pfam05534), SymE_toxin (pfam08845)