myRT

myRT report for GCA_001519275.1_ASM151927v1

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Seq: LQSJ01000314.1 Escherichia coli strain GN02169 GCID_ECOLID_00018_NODE_72.ctg_1, whole genome shotgun sequence (23530 bp)
Overview 1 RT 1: 18950-23528 bp Neighborhood of RT #1 [18950, 23530] PRK09678 RVT-Retrons Arm-DNA-bind_3 PHA02517 Feature: gene Location: 18950-19222 bp Feature: domain Description: PRK09678 Location: 18959-19115 bp Feature: domain Description: PRK09678 Location: 1 8959-1 91 1 5 bp Feature: gene Location: 19868-20836 bp Feature: gene Location: 20838-21770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20940-21534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20940-21 534 bp Feature: gene Location: 22225-23366 bp Feature: domain Description: Arm-DNA-bind_3 Location: 22234-22486 bp Feature: domain Description: Arm-DNA-bind_3 Location: 22234-22486 bp Feature: gene Location: 23369-23530 bp Feature: domain Description: PHA02517 Location: 23375-23528 bp Feature: domain Description: PHA0251 7 Location: 23375-23528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, Arm-DNA-bind_3 (pfam13356), PHA02517 (putative transposase OrfB; Reviewed)

Seq: LQSJ01000234.1 Escherichia coli strain GN02169 GCID_ECOLID_00018_NODE_31.ctg_1, whole genome shotgun sequence (48635 bp)
Overview 1 RT 1: 46041-48634 bp Neighborhood of RT #1 [46041, 48635] RVT-GII GIIM PHA02517 Feature: gene Location: 46041-46412 bp Feature: gene Location: 46327-46752 bp Feature: gene Location: 46721-48229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46979-47711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46979-47711 bp Feature: domain Description: GIIM Note: maturase Location: 47786-47984 bp Feature: domain Description: GIIM Note: maturase Location: 47786-47984 bp Feature: gene Location: 48313-48635 bp Feature: domain Description: PHA02517 Location: 48316-48634 bp Feature: domain Description: PHA02 517 Location: 48316-48634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)