myRT

myRT report for GCA_001519475.1_ASM151947v1

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Seq: LQSH01000001.1 Escherichia coli strain GN02163 GCID_ECOLID_00016_NODE_1.ctg_1, whole genome shotgun sequence (613206 bp)
Overview 1 RT 1: 498510-501970 bp Neighborhood of RT #1 [498510, 502107] EhpR_like RVT-GII RVT-GII SdpI Phage_int_SAM_2 Integrase_1 Feature: gene Location: 498510-498896 bp Ori: KUS49128.1 Feature: domain Description: EhpR_like Location: 498531-498867 bp Feature: domain Description: EhpR_like Location: 498531 -498867 bp Feature: gene Location: 499136-499366 bp Feature: gene Location: 499555-499809 bp Ori: KUS49130.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499558-499777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499558-499777 bp Feature: gene Location: 499810-500019 bp Ori: KUS49131.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499894-500011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499894-50001 1 bp Feature: gene Location: 500418-500750 bp Ori: KUS49132.1 Feature: domain Description: SdpI Location: 500496-500709 bp Feature: domain Description: SdpI Location: 500496-500709 bp Feature: gene Location: 501205-502107 bp Ori: KUS49250.1 Feature: domain Description: Phage_int_SAM_2 Location: 501226-501490 bp Feature: domain Description: Phage_int_SAM_2 Location: 501 226-501 490 bp Feature: domain Description: Integrase_1 Location: 501529-501970 bp Feature: domain Description: Integrase_1 Location: 501 529-501 970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EhpR_like (cd07261), RVT-GII, SdpI (pfam13630), Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)