myRT

myRT report for GCA_001519875.1_ASM151987v1

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Seq: LQTB01000001.1 Escherichia coli strain GN02337 GCID_ECOLID_00040_NODE_1.ctg_1, whole genome shotgun sequence (742729 bp)
Overview 1 RT 1: 98349-104258 bp Neighborhood of RT #1 [98349, 104258] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98349-98774 bp Feature: gene Location: 99685-100194 bp Ori: KUT43118.1 Feature: domain Description: HTH_36 Location: 99871-100027 bp Feature: domain Description: HTH_36 Location: 99871 -1 00027 bp Feature: gene Location: 100402-101901 bp Ori: KUT43119.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100834-101290 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 00834-1 01 290 bp Feature: gene Location: 102302-103627 bp Ori: KUT43682.1 Feature: domain Description: DUF4062 Location: 102323-102566 bp Feature: domain Description: DUF4062 Location: 1 02323-1 02566 bp Feature: gene Location: 103677-104258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: LQTB01000005.1 Escherichia coli strain GN02337 GCID_ECOLID_00040_NODE_13.ctg_1, whole genome shotgun sequence (113661 bp)
Overview 1 RT 1: 70129-75815 bp Neighborhood of RT #1 [70129, 75815] DUF4755 RVT-UG16 PRK13889 Feature: gene Location: 70129-70602 bp Ori: KUT42263.1 Feature: domain Description: DUF4755 Location: 70246-70549 bp Feature: domain Description: DUF4755 Location: 702 46-70549 bp Feature: gene Location: 71037-71587 bp Feature: gene Location: 71687-73171 bp Ori: KUT42264.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 72050-72458 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 72 050-72 458 bp Feature: gene Location: 73309-74802 bp Ori: KUT42265.1 Feature: domain Description: PRK13889 Location: 73312-73912 bp Feature: domain Description: PRK13889 Location: 73312 -73912 bp Feature: gene Location: 75450-75815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4755 (pfam15947), RVT-UG16, PRK13889 (conjugal transfer relaxase TraA; Provisional)