myRT

myRT report for GCA_001520335.1_ASM152033v1

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Seq: LQUC01000035.1 Escherichia coli strain GN02484 GCID_ECOLID_00072_NODE_13.ctg_1, whole genome shotgun sequence (93261 bp)
Overview 1 RT 1: 47620-51502 bp Neighborhood of RT #1 [47620, 51507] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47620-48078 bp Ori: KUU79879.1 Feature: domain Description: dut Location: 47626-48073 bp Feature: domain Description: dut Location: 47626-48073 bp Feature: gene Location: 48185-48781 bp Ori: KUU79880.1 Gene: slmA Feature: domain Description: slmA Location: 48191-48767 bp Feature: domain Description: slmA Location: 481 91 -48767 bp Feature: gene Location: 48827-49786 bp Ori: KUU79881.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48962-49511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48962-4951 1 bp Feature: gene Location: 50084-50725 bp Ori: KUU79882.1 Gene: pyrE Feature: domain Description: pyrE Location: 50087-50720 bp Feature: domain Description: pyrE Location: 50087-50720 bp Feature: gene Location: 50791-51507 bp Ori: KUU79883.1 Gene: rph Feature: domain Description: rph Location: 50794-51502 bp Feature: domain Description: rph Location: 50794-51 502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: LQUC01000103.1 Escherichia coli strain GN02484 GCID_ECOLID_00072_NODE_192.ctg_1, whole genome shotgun sequence (1158 bp)
Overview 1 RT 1: 397-1156 bp Neighborhood of RT #1 [397, 1158] RVT-GII RVT-GII Feature: gene Location: 397-936 bp Ori: KUU77108.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727-805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 7-805 bp Feature: gene Location: 964-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 970-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 970-1156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII