myRT

myRT report for GCA_001520695.2_ASM152069v2

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Seq: LQUJ02000001.1 Escherichia coli strain GN02545 000000F_arrow, whole genome shotgun sequence (5234609 bp)
Overview 1 RT 1: 1387393-1390724 bp 2 RT 2: 2904547-2907669 bp 3 RT 3: 4281803-4286701 bp Neighborhood of RT #1 [1387393, 1391124] HTH_Tnp_1 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [2904547, 2907680] RAYT IS285 RVT-GII InsE HTH_38 Tra8 Neighborhood of RT #3 [4281803, 4286701] RVT-Retrons Feature: gene Location: 1387393-1387596 bp Feature: domain Description: HTH_Tnp_1 Location: 1387402-1387594 bp Feature: domain Description: HTH_Tnp_1 Location: 1 387402-1 387594 bp Feature: gene Location: 1387641-1388114 bp Feature: domain Description: PHA02517 Location: 1387647-1388112 bp Feature: domain Description: PHA0251 7 Location: 1 387647-1 3881 1 2 bp Feature: gene Location: 1388204-1389712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388462-1389194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 388462-1 3891 94 bp Feature: domain Description: GIIM Note: maturase Location: 1389269-1389467 bp Feature: domain Description: GIIM Note: maturase Location: 1 389269-1 389467 bp Feature: gene Location: 1390021-1390392 bp Feature: gene Location: 1390385-1391124 bp Feature: domain Description: InsE Location: 1390388-1390724 bp Feature: domain Description: InsE Location: 1 390388-1 390724 bp Feature: gene Location: 2904547-2904669 bp Feature: domain Description: RAYT Location: 2904550-2904670 bp Feature: domain Description: RAYT Location: 2904550-2904670 bp Feature: gene Location: 2904677-2905344 bp Feature: domain Description: IS285 Location: 2904707-2905085 bp Feature: domain Description: IS285 Location: 2904707-2905085 bp Feature: gene Location: 2905487-2905949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2905499-2905691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2905499-2905691 bp Feature: gene Location: 2906204-2906572 bp Feature: domain Description: InsE Location: 2906207-2906498 bp Feature: domain Description: InsE Location: 2906207-2906498 bp Feature: gene Location: 2906529-2907680 bp Feature: domain Description: HTH_38 Location: 2906538-2906652 bp Feature: domain Description: HTH_38 Location: 2906538-2906652 bp Feature: domain Description: Tra8 Location: 2906688-2907669 bp Feature: domain Description: Tra8 Location: 2906688-2907669 bp Feature: gene Location: 4281803-4282318 bp Feature: gene Location: 4282315-4283442 bp Feature: gene Location: 4283689-4285446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4283833-4284451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4283833-4284451 bp Feature: gene Location: 4286017-4286256 bp Feature: gene Location: 4286471-4286701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), RAYT (COG1943), IS285 (COG3328), HTH_38 (pfam13936), Tra8 (COG2826), RVT-Retrons