myRT

myRT report for GCA_001521075.1_ASM152107v1

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Seq: LQTW01000150.1 Escherichia coli strain GN02446 GCID_ECOLID_00064_NODE_80.ctg_1, whole genome shotgun sequence (4315 bp)
Overview 1 RT 1: 34-4242 bp Neighborhood of RT #1 [34, 4247] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 34-335 bp Feature: gene Location: 328-537 bp Feature: gene Location: 1420-3321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1687-2518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 687-251 8 bp Feature: domain Description: Intron_maturas2 Location: 2632-2890 bp Feature: domain Description: Intron_maturas2 Location: 2632-2890 bp Feature: domain Description: HNHc Note: nucleases Location: 3064-3226 bp Feature: domain Description: HNHc Note: nucleases Location: 3064-3226 bp Feature: gene Location: 3471-3956 bp Feature: domain Description: PRK13732 Location: 3474-3954 bp Feature: domain Description: PRK1 3732 Location: 3474-3954 bp Feature: gene Location: 4014-4247 bp Feature: domain Description: DUF905 Location: 4044-4242 bp Feature: domain Description: DUF905 Location: 4044-4242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF905 (pfam06006)

Seq: LQTW01000157.1 Escherichia coli strain GN02446 GCID_ECOLID_00064_NODE_87.ctg_1, whole genome shotgun sequence (2456 bp)
Overview 1 RT 1: 46-2275 bp Neighborhood of RT #1 [46, 2283] RVT-GII GIIM Tra5 Feature: gene Location: 46-264 bp Feature: gene Location: 233-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-12 2 3 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1517 bp Feature: domain Description: GIIM Note: maturase Location: 12 98-1517 bp Feature: gene Location: 1906-2283 bp Feature: domain Description: Tra5 Location: 1909-2275 bp Feature: domain Description: Tra5 Location: 1909-2 2 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)