myRT

myRT report for GCA_001523775.1_ASM152377v1

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Seq: LOVO01000042.1 Burkholderia ubonensis strain MSMB1186 MSMB1186_137, whole genome shotgun sequence (126996 bp)
Overview 1 RT 1: 114087-119048 bp Neighborhood of RT #1 [114087, 119878] Cupin_6 AraC VOC RVT-Retrons HTH_28 rve Feature: gene Location: 114087-114914 bp Ori: KVD64477.1 Feature: domain Description: Cupin_6 Location: 114096-114555 bp Feature: domain Description: Cupin_6 Location: 1 1 4096-1 1 4555 bp Feature: domain Description: AraC Location: 114564-114903 bp Feature: domain Description: AraC Location: 1 1 4564-1 1 4903 bp Feature: gene Location: 115353-115739 bp Ori: KVD64478.1 Feature: domain Description: VOC Location: 115368-115689 bp Feature: domain Description: VOC Location: 1 1 5368-1 1 5689 bp Feature: gene Location: 116042-117082 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116507-117032 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 6507-1 1 7032 bp Feature: gene Location: 117261-117896 bp Feature: gene Location: 117893-119878 bp Ori: KVD64480.1 Feature: domain Description: HTH_28 Location: 118004-118097 bp Feature: domain Description: HTH_28 Location: 1 1 8004-1 1 8097 bp Feature: domain Description: rve Location: 118640-119048 bp Feature: domain Description: rve Location: 1 1 8640-1 1 9048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, HTH_28 (pfam13518), rve (pfam00665)

Seq: LOVO01000127.1 Burkholderia ubonensis strain MSMB1186 MSMB1186_50, whole genome shotgun sequence (383643 bp)
Overview 1 RT 1: 123991-130182 bp Neighborhood of RT #1 [123991, 130182] PRK12744 HTH_1 PBP2_CrgA_like_3 RVT-Retrons major_cap_HK97 Feature: gene Location: 123991-124764 bp Ori: KVD53211.1 Feature: domain Description: PRK12744 Location: 123997-124762 bp Feature: domain Description: PRK12 744 Location: 12 3997-12 4762 bp Feature: gene Location: 124914-125834 bp Ori: KVD53212.1 Feature: domain Description: HTH_1 Location: 124926-125100 bp Feature: domain Description: HTH_1 Location: 12 492 6-12 5100 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 125190-125793 bp Feature: domain Description: PBP2 _CrgA_like_3 Location: 12 5190-12 5793 bp Feature: gene Location: 126365-127390 bp Ori: KVD53446.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126536-127055 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 6536-12 7055 bp Feature: gene Location: 128550-129872 bp Ori: KVD53213.1 Feature: domain Description: major_cap_HK97 Location: 128763-129843 bp Feature: domain Description: major_cap_HK97 Location: 12 8763-12 9843 bp Feature: gene Location: 129925-130182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12744 (SDR family oxidoreductase), HTH_1 (pfam00126), PBP2_CrgA_like_3 (cd08472), RVT-Retrons, major_cap_HK97 (TIGR01554)