myRT

myRT report for GCA_001524045.1_ASM152404v1

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Seq: LOWS01000092.1 Burkholderia vietnamiensis strain FL-5-2-10-S1-D0 FL-5-2-10-S1-D0_76, whole genome shotgun sequence (293631 bp)
Overview 1 RT 1: 109813-118142 bp Neighborhood of RT #1 [109813, 118142] RVT-UG7 Feature: gene Location: 109813-110514 bp Feature: gene Location: 110520-111074 bp Feature: gene Location: 112118-113809 bp Ori: KVF31174.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 112541-112955 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 1 2541 -1 1 2955 bp Feature: gene Location: 113799-114521 bp Feature: gene Location: 116316-118142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: LOWS01000048.1 Burkholderia vietnamiensis strain FL-5-2-10-S1-D0 FL-5-2-10-S1-D0_36, whole genome shotgun sequence (301282 bp)
Overview 1 RT 1: 245374-248260 bp Neighborhood of RT #1 [245374, 248283] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 245374-245676 bp Feature: gene Location: 245721-246074 bp Feature: gene Location: 246085-247080 bp Ori: KVF35820.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 246178-246865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 46178-2 46865 bp Feature: gene Location: 247406-247783 bp Ori: KVF35746.1 Feature: domain Description: Avd_like Location: 247433-247739 bp Feature: domain Description: Avd_like Location: 2 47433-2 47739 bp Feature: gene Location: 247798-248283 bp Ori: KVF35747.1 Feature: domain Description: DUF1566 Location: 248080-248260 bp Feature: domain Description: DUF1566 Location: 2 48080-2 482 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: LOWS01000026.1 Burkholderia vietnamiensis strain FL-5-2-10-S1-D0 FL-5-2-10-S1-D0_16, whole genome shotgun sequence (108283 bp)
Overview 1 RT 1: 34644-39773 bp Neighborhood of RT #1 [34644, 39796] YhaK PRK03767 RVT-GII GIIM LrgB Feature: gene Location: 34644-35369 bp Ori: KVF38147.1 Feature: domain Description: YhaK Location: 34647-35349 bp Feature: domain Description: YhaK Location: 3 4647-3 53 49 bp Feature: gene Location: 35432-36034 bp Ori: KVF38148.1 Feature: domain Description: PRK03767 Location: 35435-36029 bp Feature: domain Description: PRK03 767 Location: 3 543 5-3 6029 bp Feature: gene Location: 36636-38006 bp Ori: KVF38149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36972-37584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6972-3 7584 bp Feature: domain Description: GIIM Note: maturase Location: 37644-37848 bp Feature: domain Description: GIIM Note: maturase Location: 3 7644-3 7848 bp Feature: gene Location: 38443-38772 bp Feature: gene Location: 39062-39796 bp Ori: KVF38151.1 Feature: domain Description: LrgB Location: 39137-39773 bp Feature: domain Description: LrgB Location: 3 913 7-3 9773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhaK (COG1741), PRK03767 (NAD(P)H:quinone oxidoreductase; Provisional), RVT-GII, GIIM (pfam08388), LrgB (pfam04172)