myRT

myRT report for GCA_001524825.1_ASM152482v1

Download annotations/find similar RTs

Seq: LOXU01000004.1 Burkholderia anthina strain MSMB0848 MSMB0848_13, whole genome shotgun sequence (195292 bp)
Overview 1 RT 1: 93839-99907 bp Neighborhood of RT #1 [93839, 99933] MFS_MucK Histone_HNS RVT-Retrons his_ut_repres HutH Feature: gene Location: 93839-95086 bp Feature: domain Description: MFS_MucK Location: 93929-95063 bp Feature: domain Description: MFS_MucK Location: 93929-95063 bp Feature: gene Location: 95386-95715 bp Feature: domain Description: Histone_HNS Location: 95407-95644 bp Feature: domain Description: Histone_HNS Location: 95407-95644 bp Feature: gene Location: 96026-97375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96491-97127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96491 -971 27 bp Feature: gene Location: 97634-98389 bp Feature: domain Description: his_ut_repres Location: 97712-98384 bp Feature: domain Description: his_ut_repres Location: 9771 2-98384 bp Feature: gene Location: 98440-99933 bp Feature: domain Description: HutH Location: 98452-99907 bp Feature: domain Description: HutH Location: 98452-99907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, his_ut_repres (TIGR02018), HutH (COG2986)

Seq: LOXU01000025.1 Burkholderia anthina strain MSMB0848 MSMB0848_32, whole genome shotgun sequence (2295 bp)
Overview 1 RT 1: 611-1928 bp Neighborhood of RT #1 [611, 2134] RVT_N RVT-GII YkfC Feature: gene Location: 611-2134 bp Feature: RT Description: RVT_N Location: 659-902 bp Feature: RT Description: RVT_N Location: 659-902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1613 bp Feature: domain Description: YkfC Location: 1739-1928 bp Feature: domain Description: YkfC Location: 1739-192 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)