myRT

myRT report for GCA_001525285.1_ASM152528v1

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Seq: LRJH01000009.1 Enterobacter cloacae subsp. cloacae strain SMART_1312 GCID_ENTES_00099_NODE_17.ctg_1, whole genome shotgun sequence (79849 bp)
Overview 1 RT 1: 52341-58338 bp Neighborhood of RT #1 [52341, 58352] PRK11352 PHA02517 RVT-GII GIIM COG3547 fghA_ester_D Feature: gene Location: 52341-52649 bp Ori: KVJ42059.1 Feature: domain Description: PRK11352 Location: 52506-52647 bp Feature: domain Description: PRK1 1 352 Location: 52506-52647 bp Feature: gene Location: 52865-53290 bp Ori: KVJ42060.1 Feature: domain Description: PHA02517 Location: 52886-53225 bp Feature: domain Description: PHA0251 7 Location: 52886-53225 bp Feature: gene Location: 53897-55405 bp Ori: KVJ42089.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54155-54887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 55-54887 bp Feature: domain Description: GIIM Note: maturase Location: 54962-55160 bp Feature: domain Description: GIIM Note: maturase Location: 54962-551 60 bp Feature: gene Location: 55947-57023 bp Ori: KVJ42061.1 Feature: domain Description: COG3547 Location: 55986-56907 bp Feature: domain Description: COG3547 Location: 55986-56907 bp Feature: gene Location: 57516-58352 bp Ori: KVJ42062.1 Feature: domain Description: fghA_ester_D Location: 57522-58338 bp Feature: domain Description: fghA_ester_D Location: 57522-58338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11352 (formaldehyde-responsive transcriptional repressor FrmR), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), fghA_ester_D (TIGR02821)

Seq: LRJH01000013.1 Enterobacter cloacae subsp. cloacae strain SMART_1312 GCID_ENTES_00099_NODE_20.ctg_1, whole genome shotgun sequence (70938 bp)
Overview 1 RT 1: 33906-42122 bp Neighborhood of RT #1 [33906, 42235] RVT-Retrons COG4742 DUF3883 Feature: gene Location: 33906-34115 bp Feature: gene Location: 34746-37724 bp Feature: gene Location: 38032-39174 bp Ori: KVJ40614.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38257-38899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 382 57-38899 bp Feature: gene Location: 39409-40197 bp Ori: KVJ40615.1 Feature: domain Description: COG4742 Location: 39952-40183 bp Feature: domain Description: COG4742 Location: 39952 -40183 bp Feature: gene Location: 41093-42235 bp Ori: KVJ40616.1 Feature: domain Description: DUF3883 Location: 41849-42122 bp Feature: domain Description: DUF3883 Location: 41849-42 12 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG4742 (Predicted transcriptional regulator, contains HTH domain ), DUF3883 (pfam13020)

Seq: LRJH01000034.1 Enterobacter cloacae subsp. cloacae strain SMART_1312 GCID_ENTES_00099_NODE_5.ctg_1, whole genome shotgun sequence (313302 bp)
Overview 1 RT 1: 269083-275276 bp Neighborhood of RT #1 [269083, 275281] RVT-UG14 proA proB Feature: gene Location: 269083-269397 bp Feature: gene Location: 269766-270359 bp Feature: gene Location: 270363-271877 bp Ori: KVJ36766.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 270768-271236 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 270768-27123 6 bp Feature: gene Location: 272913-274166 bp Ori: KVJ36767.1 Feature: domain Description: proA Location: 272940-274131 bp Feature: domain Description: proA Location: 272940-27413 1 bp Feature: gene Location: 274178-275281 bp Ori: KVJ36768.1 Feature: domain Description: proB Location: 274193-275276 bp Feature: domain Description: proB Location: 274193 -275276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, proA (TIGR00407), proB (TIGR01027)

Seq: LRJH01000023.1 Enterobacter cloacae subsp. cloacae strain SMART_1312 GCID_ENTES_00099_NODE_3.ctg_1, whole genome shotgun sequence (378720 bp)
Overview 1 RT 1: 257687-267701 bp Neighborhood of RT #1 [257687, 267733] YeeA YeeA RVT-UG5 nitrilase YeeA TIGR02687 Feature: gene Location: 257687-259621 bp Ori: KVJ38895.1 Feature: domain Description: YeeA Location: 258326-259037 bp Feature: domain Description: YeeA Location: 258326-259037 bp Feature: domain Description: YeeA Location: 259193-259517 bp Feature: domain Description: YeeA Location: 259193-259517 bp Feature: gene Location: 259614-260045 bp Feature: gene Location: 260126-263125 bp Ori: KVJ38897.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 260588-261077 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 260588-261077 bp Feature: domain Description: nitrilase Location: 262313-263030 bp Feature: domain Description: nitrilase Location: 262313-263030 bp Feature: gene Location: 263296-264912 bp Ori: KVJ39001.1 Feature: domain Description: YeeA Location: 263827-264844 bp Feature: domain Description: YeeA Location: 263827-264 84 4 bp Feature: gene Location: 265130-267733 bp Ori: KVJ38898.1 Feature: domain Description: TIGR02687 Location: 265148-267701 bp Feature: domain Description: TIGR02687 Location: 26514 8-267701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-UG5, nitrilase (cl11424), TIGR02687 (TIGR02687 family protein)