myRT

myRT report for GCA_001525855.1_ASM152585v1

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Seq: LOVD01000097.1 Burkholderia ubonensis strain MSMB1158 MSMB1158_54, whole genome shotgun sequence (55165 bp)
Overview 1 RT 1: 31389-38857 bp Neighborhood of RT #1 [31389, 38931] P Q RVT-GII GIIM COG3547 DUF3396 Feature: gene Location: 31389-33158 bp Feature: domain Description: P Location: 31419-33150 bp Feature: domain Description: P Location: 31 41 9-331 50 bp Feature: gene Location: 33155-34207 bp Feature: domain Description: Q Location: 33158-34196 bp Feature: domain Description: Q Location: 331 58-341 96 bp Feature: gene Location: 34677-36041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35010-35625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3501 0-35625 bp Feature: domain Description: GIIM Note: maturase Location: 35682-35898 bp Feature: domain Description: GIIM Note: maturase Location: 35682-35898 bp Feature: gene Location: 36179-37216 bp Feature: domain Description: COG3547 Location: 36194-37160 bp Feature: domain Description: COG3547 Location: 361 94-371 60 bp Feature: gene Location: 37843-38931 bp Feature: domain Description: DUF3396 Location: 38224-38857 bp Feature: domain Description: DUF3396 Location: 38224-38857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), DUF3396 (pfam11876)

Seq: LOVD01000019.1 Burkholderia ubonensis strain MSMB1158 MSMB1158_116, whole genome shotgun sequence (469675 bp)
Overview 1 RT 1: 462504-469380 bp Neighborhood of RT #1 [462504, 469385] Cupin_6 AraC VOC RVT-Retrons DUF3141 PRK07533 Feature: gene Location: 462504-463331 bp Feature: domain Description: Cupin_6 Location: 462513-462972 bp Feature: domain Description: Cupin_6 Location: 462 513-462 972 bp Feature: domain Description: AraC Location: 462981-463320 bp Feature: domain Description: AraC Location: 462 981-46332 0 bp Feature: gene Location: 463770-464156 bp Feature: domain Description: VOC Location: 463785-464106 bp Feature: domain Description: VOC Location: 463785-464106 bp Feature: gene Location: 464459-465808 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 464924-465560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46492 4-465560 bp Feature: gene Location: 466057-468315 bp Feature: domain Description: DUF3141 Location: 466183-467914 bp Feature: domain Description: DUF3141 Location: 466183-467914 bp Feature: gene Location: 468606-469385 bp Feature: domain Description: PRK07533 Location: 468624-469380 bp Feature: domain Description: PRK07533 Location: 46862 4-469380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339), PRK07533 (enoyl- reductase FabI)