myRT

myRT report for GCA_001527365.1_ASM152736v1

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Seq: LOZE01000083.1 Burkholderia ubonensis strain MSMB2058 MSMB2058_44, whole genome shotgun sequence (92102 bp)
Overview 1 RT 1: 58713-65931 bp Neighborhood of RT #1 [58713, 65966] gltS HTH_33 DDE_3 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 58713-59936 bp Feature: domain Description: gltS Location: 58719-59925 bp Feature: domain Description: gltS Location: 5871 9-59925 bp Feature: gene Location: 60370-61023 bp Feature: domain Description: HTH_33 Location: 60397-60565 bp Feature: domain Description: HTH_33 Location: 60397-60565 bp Feature: domain Description: DDE_3 Location: 60610-61009 bp Feature: domain Description: DDE_3 Location: 6061 0-61 009 bp Feature: gene Location: 61071-62360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61275-61965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 275-61 965 bp Feature: gene Location: 63998-65581 bp Feature: domain Description: LZ_Tnp_IS66 Location: 64139-64352 bp Feature: domain Description: LZ_Tnp_IS66 Location: 641 39-64352 bp Feature: domain Description: zf-IS66 Location: 64379-64511 bp Feature: domain Description: zf-IS66 Location: 64379-6451 1 bp Feature: domain Description: DDE_Tnp_IS66 Location: 64559-65426 bp Feature: domain Description: DDE_Tnp_IS66 Location: 64559-65426 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 65444-65558 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 65444-65558 bp Feature: gene Location: 65613-65966 bp Feature: domain Description: TnpB_IS66 Location: 65640-65931 bp Feature: domain Description: TnpB_IS66 Location: 65640-65931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gltS (TIGR00210), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: LOZE01000130.1 Burkholderia ubonensis strain MSMB2058 MSMB2058_87, whole genome shotgun sequence (34253 bp)
Overview 1 RT 1: 27212-33245 bp Neighborhood of RT #1 [27212, 33245] AraC VOC RVT-Retrons DUF3141 Feature: gene Location: 27212-28039 bp Feature: domain Description: AraC Location: 27674-28028 bp Feature: domain Description: AraC Location: 2 7674-2 802 8 bp Feature: gene Location: 28478-28864 bp Feature: domain Description: VOC Location: 28493-28814 bp Feature: domain Description: VOC Location: 2 8493-2 8814 bp Feature: gene Location: 29167-30516 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29632-30268 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9632 -302 68 bp Feature: gene Location: 30765-33023 bp Feature: domain Description: DUF3141 Location: 30891-32622 bp Feature: domain Description: DUF3141 Location: 30891-32 62 2 bp Feature: gene Location: 33033-33245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339)