myRT

myRT report for GCA_001527385.1_ASM152738v1

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Seq: LOZF01000081.1 Burkholderia ubonensis strain MSMB2059 MSMB2059_36, whole genome shotgun sequence (644 bp)
Overview 1 RT 1: 1-511 bp Neighborhood of RT #1 [1, 644] RVT-GII GIIM Feature: gene Location: 1-644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-238 bp Feature: domain Description: GIIM Note: maturase Location: 295-511 bp Feature: domain Description: GIIM Note: maturase Location: 295-51 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LOZF01000058.1 Burkholderia ubonensis strain MSMB2059 MSMB2059_151, whole genome shotgun sequence (88357 bp)
Overview 1 RT 1: 54968-62186 bp Neighborhood of RT #1 [54968, 62221] gltS HTH_33 DDE_3 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 54968-56191 bp Ori: KVM35148.1 Feature: domain Description: gltS Location: 54974-56180 bp Feature: domain Description: gltS Location: 54974-56180 bp Feature: gene Location: 56625-57278 bp Ori: KVM35149.1 Feature: domain Description: HTH_33 Location: 56652-56820 bp Feature: domain Description: HTH_33 Location: 56652 -5682 0 bp Feature: domain Description: DDE_3 Location: 56865-57264 bp Feature: domain Description: DDE_3 Location: 56865-572 64 bp Feature: gene Location: 57326-58615 bp Ori: KVM35150.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57530-58220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57530-582 2 0 bp Feature: gene Location: 60253-61836 bp Ori: KVM35151.1 Feature: domain Description: LZ_Tnp_IS66 Location: 60394-60607 bp Feature: domain Description: LZ_Tnp_IS66 Location: 60394-60607 bp Feature: domain Description: zf-IS66 Location: 60634-60766 bp Feature: domain Description: zf-IS66 Location: 60634-60766 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60814-61681 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60814-61681 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61699-61813 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61699-61813 bp Feature: gene Location: 61868-62221 bp Ori: KVM35152.1 Feature: domain Description: TnpB_IS66 Location: 61895-62186 bp Feature: domain Description: TnpB_IS66 Location: 61895-62 186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gltS (TIGR00210), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: LOZF01000009.1 Burkholderia ubonensis strain MSMB2059 MSMB2059_107, whole genome shotgun sequence (34841 bp)
Overview 1 RT 1: 27800-33833 bp Neighborhood of RT #1 [27800, 33833] AraC VOC RVT-Retrons DUF3141 Feature: gene Location: 27800-28627 bp Ori: KVM42891.1 Feature: domain Description: AraC Location: 28262-28616 bp Feature: domain Description: AraC Location: 28262-28616 bp Feature: gene Location: 29066-29452 bp Ori: KVM42892.1 Feature: domain Description: VOC Location: 29081-29402 bp Feature: domain Description: VOC Location: 29081-29402 bp Feature: gene Location: 29755-31104 bp Ori: KVM42893.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30220-30856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 0220-3 0856 bp Feature: gene Location: 31353-33611 bp Ori: KVM42894.1 Feature: domain Description: DUF3141 Location: 31479-33210 bp Feature: domain Description: DUF3 141 Location: 3 1479-3 3 210 bp Feature: gene Location: 33621-33833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339)