myRT

myRT report for GCA_001527605.1_ASM152760v1

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Seq: LOZQ01000031.1 Burkholderia diffusa strain MSMB1544 MSMB1544_38, whole genome shotgun sequence (298715 bp)
Overview 1 RT 1: 42673-47547 bp Neighborhood of RT #1 [42673, 47558] PssA PRK05305 RVT-GII GIIM HNHc PRK05479 ilvH Feature: gene Location: 42673-43545 bp Feature: domain Description: PssA Location: 42811-43489 bp Feature: domain Description: PssA Location: 4281 1 -43489 bp Feature: gene Location: 43561-44205 bp Feature: domain Description: PRK05305 Location: 43585-44197 bp Feature: domain Description: PRK05305 Location: 43585-441 97 bp Feature: gene Location: 44322-45686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44340-44967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44340-44967 bp Feature: domain Description: GIIM Note: maturase Location: 45018-45252 bp Feature: domain Description: GIIM Note: maturase Location: 4501 8-45252 bp Feature: domain Description: HNHc Note: nucleases Location: 45483-45636 bp Feature: domain Description: HNHc Note: nucleases Location: 45483-45636 bp Feature: gene Location: 45947-46963 bp Feature: domain Description: PRK05479 Location: 45950-46931 bp Feature: domain Description: PRK05479 Location: 45950-46931 bp Feature: gene Location: 47067-47558 bp Feature: domain Description: ilvH Location: 47070-47547 bp Feature: domain Description: ilvH Location: 47070-47547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05479 (ketol-acid reductoisomerase; Provisional), ilvH (PRK11895)

Seq: LOZQ01000008.1 Burkholderia diffusa strain MSMB1544 MSMB1544_17, whole genome shotgun sequence (161067 bp)
Overview 1 RT 1: 53942-59676 bp 2 RT 2: 76433-80525 bp Neighborhood of RT #1 [53942, 59676] RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [76433, 80647] RVT-GII GIIM Prim_Zn_Ribbon Toprim_3 Feature: gene Location: 53942-55462 bp Feature: gene Location: 55542-55952 bp Feature: gene Location: 56290-57990 bp Feature: RT Description: RVT_N Location: 56347-56590 bp Feature: RT Description: RVT_N Location: 56347-56590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56635-57283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56635-572 83 bp Feature: domain Description: GIIM Note: maturase Location: 57334-57568 bp Feature: domain Description: GIIM Note: maturase Location: 57334-57568 bp Feature: domain Description: HNHc Note: nucleases Location: 57799-57952 bp Feature: domain Description: HNHc Note: nucleases Location: 57799-57952 bp Feature: gene Location: 58769-59275 bp Feature: gene Location: 59284-59676 bp Feature: gene Location: 76433-76771 bp Feature: gene Location: 77042-77296 bp Feature: gene Location: 77391-78761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77727-78342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7772 7-78342 bp Feature: domain Description: GIIM Note: maturase Location: 78399-78603 bp Feature: domain Description: GIIM Note: maturase Location: 78399-78603 bp Feature: gene Location: 79180-79404 bp Feature: gene Location: 79505-80647 bp Feature: domain Description: Prim_Zn_Ribbon Location: 79610-79712 bp Feature: domain Description: Prim_Zn_Ribbon Location: 79610-79712 bp Feature: domain Description: Toprim_3 Location: 80234-80525 bp Feature: domain Description: Toprim_3 Location: 802 34-8052 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362)