myRT

myRT report for GCA_001527955.1_ASM152795v1

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Seq: LPAJ01000125.1 Burkholderia ubonensis strain MSMB1599WGS MSMB1599WGS_58, whole genome shotgun sequence (154240 bp)
Overview 1 RT 1: 85824-91931 bp Neighborhood of RT #1 [85824, 91933] HTH_MARR RVT-GII GIIM Phenol_MetA_deg PRK15122 Feature: gene Location: 85824-86087 bp Feature: gene Location: 86254-86541 bp Feature: domain Description: HTH_MARR Location: 86275-86527 bp Feature: domain Description: HTH_MARR Location: 86275-86527 bp Feature: gene Location: 86611-87975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86944-87559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86944-87559 bp Feature: domain Description: GIIM Note: maturase Location: 87616-87832 bp Feature: domain Description: GIIM Note: maturase Location: 8761 6-87832 bp Feature: gene Location: 88435-89178 bp Feature: domain Description: Phenol_MetA_deg Location: 88552-89173 bp Feature: domain Description: Phenol_MetA_deg Location: 88552-891 73 bp Feature: gene Location: 89255-91933 bp Feature: domain Description: PRK15122 Location: 89258-91931 bp Feature: domain Description: PRK1 51 22 Location: 89258-91 931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), RVT-GII, GIIM (pfam08388), Phenol_MetA_deg (pfam13557), PRK15122 (magnesium-transporting ATPase; Provisional)

Seq: LPAJ01000127.1 Burkholderia ubonensis strain MSMB1599WGS MSMB1599WGS_6, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 438-1665 bp Neighborhood of RT #1 [438, 1844] RVT-GII GIIM Feature: gene Location: 438-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1392 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LPAJ01000124.1 Burkholderia ubonensis strain MSMB1599WGS MSMB1599WGS_57, whole genome shotgun sequence (209024 bp)
Overview 1 RT 1: 150783-158237 bp Neighborhood of RT #1 [150783, 158248] Rve DUF3141 RVT-Retrons VOC AraC Feature: gene Location: 150783-150941 bp Feature: domain Description: Rve Location: 150813-150939 bp Feature: domain Description: Rve Location: 150813 -15093 9 bp Feature: gene Location: 152413-154695 bp Feature: domain Description: DUF3141 Location: 152539-154270 bp Feature: domain Description: DUF3 141 Location: 15253 9-154270 bp Feature: gene Location: 154944-156293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 155409-156045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 155409-156045 bp Feature: gene Location: 156596-156982 bp Feature: domain Description: VOC Location: 156611-156932 bp Feature: domain Description: VOC Location: 156611-15693 2 bp Feature: gene Location: 157421-158248 bp Feature: domain Description: AraC Location: 157883-158237 bp Feature: domain Description: AraC Location: 157883 -15823 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), AraC (COG2207)