myRT

myRT report for GCA_001527985.1_ASM152798v1

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Seq: LPAK01000015.1 Burkholderia ubonensis strain MSMB1600WGS MSMB1600WGS_14, whole genome shotgun sequence (425077 bp)
Overview 1 RT 1: 318087-324069 bp Neighborhood of RT #1 [318087, 324069] AraC VOC RVT-Retrons DUF3141 Feature: gene Location: 318087-318914 bp Ori: KVO43538.1 Feature: domain Description: AraC Location: 318549-318903 bp Feature: domain Description: AraC Location: 31 8549-31 8903 bp Feature: gene Location: 319353-319739 bp Ori: KVO43539.1 Feature: domain Description: VOC Location: 319368-319689 bp Feature: domain Description: VOC Location: 31 9368-31 9689 bp Feature: gene Location: 320042-321391 bp Ori: KVO43540.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 320507-321143 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 320507-321 1 43 bp Feature: gene Location: 321622-323880 bp Ori: KVO43541.1 Feature: domain Description: DUF3141 Location: 321748-323479 bp Feature: domain Description: DUF31 41 Location: 321 748-323479 bp Feature: gene Location: 323890-324069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339)

Seq: LPAK01000064.1 Burkholderia ubonensis strain MSMB1600WGS MSMB1600WGS_59, whole genome shotgun sequence (360607 bp)
Overview 1 RT 1: 179694-184236 bp Neighborhood of RT #1 [179694, 184253] RVT-UG16 SRAP Feature: gene Location: 179694-179942 bp Feature: gene Location: 180291-180497 bp Feature: gene Location: 180678-182159 bp Ori: KVO34139.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 181038-181446 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 181038-181446 bp Feature: gene Location: 183126-183320 bp Feature: gene Location: 183597-184253 bp Ori: KVO34141.1 Feature: domain Description: SRAP Location: 183753-184236 bp Feature: domain Description: SRAP Location: 183753-1842 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, SRAP (pfam02586)

Seq: LPAK01000041.1 Burkholderia ubonensis strain MSMB1600WGS MSMB1600WGS_38, whole genome shotgun sequence (157691 bp)
Overview 1 RT 1: 92988-98589 bp Neighborhood of RT #1 [92988, 98594] SYLF RVT-GII GIIM GT4_AviGT4-like COG4637 Feature: gene Location: 92988-93428 bp Feature: gene Location: 93650-94237 bp Ori: KVO38010.1 Feature: domain Description: SYLF Location: 93740-94226 bp Feature: domain Description: SYLF Location: 93 740-94226 bp Feature: gene Location: 94357-95721 bp Ori: KVO38068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94690-95305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94690-953 05 bp Feature: domain Description: GIIM Note: maturase Location: 95362-95578 bp Feature: domain Description: GIIM Note: maturase Location: 953 62-95578 bp Feature: gene Location: 96181-97245 bp Ori: KVO38011.1 Feature: domain Description: GT4_AviGT4-like Location: 96187-97192 bp Feature: domain Description: GT4_AviGT4-like Location: 96187-97192 bp Feature: gene Location: 97416-98594 bp Ori: KVO38012.1 Feature: domain Description: COG4637 Location: 97428-98589 bp Feature: domain Description: COG463 7 Location: 97428-98589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SYLF (COG2930), RVT-GII, GIIM (pfam08388), GT4_AviGT4-like (cd03802), COG4637 (Predicted ATPase )