myRT

myRT report for GCA_001528005.1_ASM152800v1

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Seq: LPBU01000044.1 Burkholderia territorii strain MSMB1919WGS MSMB1919WGS_5, whole genome shotgun sequence (81811 bp)
Overview 1 RT 1: 22025-24815 bp Neighborhood of RT #1 [22025, 25807] PinE RVT-UG8 Feature: gene Location: 22025-22645 bp Ori: KVQ61018.1 Feature: domain Description: PinE Location: 22034-22589 bp Feature: domain Description: PinE Location: 22034-22589 bp Feature: gene Location: 22855-23937 bp Feature: gene Location: 24377-25807 bp Ori: KVQ61066.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 24380-24815 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 24380-2481 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG8

Seq: LPBU01000051.1 Burkholderia territorii strain MSMB1919WGS MSMB1919WGS_56, whole genome shotgun sequence (328279 bp)
Overview 1 RT 1: 140748-151450 bp Neighborhood of RT #1 [140748, 151458] PRK10565 PRK00711 RVT_N RVT-GII GIIM HNHc PRK05297 yhbS Feature: gene Location: 140748-142292 bp Ori: KVQ60023.1 Feature: domain Description: PRK10565 Location: 140787-142257 bp Feature: domain Description: PRK10565 Location: 140787-142 2 57 bp Feature: gene Location: 142344-143645 bp Ori: KVQ60024.1 Feature: domain Description: PRK00711 Location: 142347-143613 bp Feature: domain Description: PRK00711 Location: 142 347-143613 bp Feature: gene Location: 145001-146701 bp Ori: KVQ60025.1 Feature: domain Description: RVT_N Location: 145058-145301 bp Feature: domain Description: RVT_N Location: 145058-145301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145346-145994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145346-145994 bp Feature: domain Description: GIIM Note: maturase Location: 146045-146279 bp Feature: domain Description: GIIM Note: maturase Location: 146045-1462 79 bp Feature: domain Description: HNHc Note: nucleases Location: 146507-146663 bp Feature: domain Description: HNHc Note: nucleases Location: 146507-146663 bp Feature: gene Location: 146852-150916 bp Ori: KVQ60026.1 Feature: domain Description: PRK05297 Location: 146867-150914 bp Feature: domain Description: PRK052 97 Location: 146867-150914 bp Feature: gene Location: 150916-151458 bp Ori: KVQ60027.1 Feature: domain Description: yhbS Location: 150952-151450 bp Feature: domain Description: yhbS Location: 150952 -151450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10565 (putative carbohydrate kinase; Provisional), PRK00711 (D-amino acid dehydrogenase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional), yhbS (COG3153)