myRT

myRT report for GCA_001528145.1_ASM152814v1

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Seq: LPAT01000035.1 Burkholderia ubonensis strain MSMB1627WGS MSMB1627WGS_17, whole genome shotgun sequence (149064 bp)
Overview 1 RT 1: 111051-113877 bp Neighborhood of RT #1 [111051, 113900] HTH_ARSR RVT-DGRs Avd_like DUF1566 Feature: gene Location: 111051-111482 bp Feature: domain Description: HTH_ARSR Location: 111069-111201 bp Feature: domain Description: HTH_ARSR Location: 1 1 1 069-1 1 1 201 bp Feature: gene Location: 111511-111711 bp Feature: gene Location: 111708-112721 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 111798-112563 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 1 798-1 1 2563 bp Feature: gene Location: 113065-113421 bp Feature: domain Description: Avd_like Location: 113092-113398 bp Feature: domain Description: Avd_like Location: 1 1 3092-1 1 3398 bp Feature: gene Location: 113436-113900 bp Feature: domain Description: DUF1566 Location: 113697-113877 bp Feature: domain Description: DUF1 566 Location: 1 1 3697-1 1 3877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: LPAT01000021.1 Burkholderia ubonensis strain MSMB1627WGS MSMB1627WGS_118, whole genome shotgun sequence (108924 bp)
Overview 1 RT 1: 107037-108733 bp Neighborhood of RT #1 [107037, 108924] CheX REC RVT-GII Feature: gene Location: 107037-107996 bp Feature: domain Description: CheX Location: 107553-107853 bp Feature: domain Description: CheX Location: 107553-107853 bp Feature: gene Location: 108039-108404 bp Feature: domain Description: REC Location: 108054-108396 bp Feature: domain Description: REC Location: 108054-108396 bp Feature: gene Location: 108442-108924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108478-108733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108478-108733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII

Seq: LPAT01000091.1 Burkholderia ubonensis strain MSMB1627WGS MSMB1627WGS_68, whole genome shotgun sequence (294855 bp)
Overview 1 RT 1: 122102-128198 bp Neighborhood of RT #1 [122102, 128209] PRK00180 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 122102-122383 bp Feature: domain Description: PRK00180 Location: 122285-122375 bp Feature: domain Description: PRK00180 Location: 122285-1223 75 bp Feature: gene Location: 122393-124651 bp Feature: domain Description: DUF3141 Location: 122519-124250 bp Feature: domain Description: DUF3 141 Location: 122519-124250 bp Feature: gene Location: 124900-126249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125365-126001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1253 65-126001 bp Feature: gene Location: 126552-126938 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: gene Location: 127382-128209 bp Feature: domain Description: Cupin_6 Location: 127391-127850 bp Feature: domain Description: Cupin_6 Location: 1273 91-127850 bp Feature: domain Description: AraC Location: 127859-128198 bp Feature: domain Description: AraC Location: 127859-128198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00180 (acetate kinase A/propionate kinase 2; Reviewed), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: LPAT01000081.1 Burkholderia ubonensis strain MSMB1627WGS MSMB1627WGS_59, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 62-1466 bp Neighborhood of RT #1 [62, 1861] RVT-GII Feature: gene Location: 62-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-14 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII