myRT

myRT report for GCA_001528525.1_ASM152852v1

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Seq: LPCO01000006.1 Burkholderia vietnamiensis strain AU25004 AU25004_104, whole genome shotgun sequence (289224 bp)
Overview 1 RT 1: 255602-258330 bp Neighborhood of RT #1 [255602, 258330] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 255602-256066 bp Feature: domain Description: DUF1566 Location: 255863-256043 bp Feature: domain Description: DUF1 566 Location: 255863-256043 bp Feature: gene Location: 256081-256437 bp Feature: domain Description: Avd_like Location: 256108-256414 bp Feature: domain Description: Avd_like Location: 2561 08-25641 4 bp Feature: gene Location: 256782-257792 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 256872-257631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 256872-257631 bp Feature: gene Location: 257789-258127 bp Feature: gene Location: 258124-258330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: LPCO01000023.1 Burkholderia vietnamiensis strain AU25004 AU25004_24, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 382-1594 bp Neighborhood of RT #1 [382, 1752] RVT-GII GIIM Feature: gene Location: 382-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718-1330 bp Feature: domain Description: GIIM Note: maturase Location: 1390-1594 bp Feature: domain Description: GIIM Note: maturase Location: 1390-1594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LPCO01000096.1 Burkholderia vietnamiensis strain AU25004 AU25004_90, whole genome shotgun sequence (169745 bp)
Overview 1 RT 1: 121083-127139 bp Neighborhood of RT #1 [121083, 127195] ilvH PRK05479 RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 121083-121574 bp Feature: domain Description: ilvH Location: 121086-121563 bp Feature: domain Description: ilvH Location: 121086-121563 bp Feature: gene Location: 121681-122697 bp Feature: domain Description: PRK05479 Location: 121684-122665 bp Feature: domain Description: PRK05479 Location: 121684-122665 bp Feature: gene Location: 123834-125546 bp Feature: RT Description: RVT_N Location: 123891-124134 bp Feature: RT Description: RVT_N Location: 123 891-12413 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124179-124827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124179-124827 bp Feature: domain Description: GIIM Note: maturase Location: 124878-125112 bp Feature: domain Description: GIIM Note: maturase Location: 124878-125112 bp Feature: domain Description: HNHc Note: nucleases Location: 125343-125496 bp Feature: domain Description: HNHc Note: nucleases Location: 1253 43 -125496 bp Feature: gene Location: 125663-126307 bp Feature: domain Description: PRK05305 Location: 125687-126299 bp Feature: domain Description: PRK053 05 Location: 125687-126299 bp Feature: gene Location: 126323-127195 bp Feature: domain Description: PssA Location: 126461-127139 bp Feature: domain Description: PssA Location: 126461-12713 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)