myRT

myRT report for GCA_001528565.1_ASM152856v1

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Seq: LPCQ01000077.1 Burkholderia vietnamiensis strain AU26564 AU26564_169, whole genome shotgun sequence (2337 bp)
Overview 1 RT 1: 78-1743 bp Neighborhood of RT #1 [78, 1743] RVT-GII Feature: gene Location: 78-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 4-900 bp Feature: gene Location: 1123-1356 bp Feature: gene Location: 1534-1743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPCQ01000260.1 Burkholderia vietnamiensis strain AU26564 AU26564_55, whole genome shotgun sequence (7669 bp)
Overview 1 RT 1: 5688-7462 bp Neighborhood of RT #1 [5688, 7620] HipB Cupin_2 YncA RVT-GII GIIM Feature: gene Location: 5688-6353 bp Feature: domain Description: HipB Location: 5742-6021 bp Feature: domain Description: HipB Location: 5742 -602 1 bp Feature: domain Description: Cupin_2 Location: 6123-6267 bp Feature: domain Description: Cupin_2 Location: 612 3-62 67 bp Feature: gene Location: 6350-6898 bp Feature: domain Description: YncA Location: 6389-6875 bp Feature: domain Description: YncA Location: 6389-6875 bp Feature: gene Location: 7036-7620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7066-7198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7066-7198 bp Feature: domain Description: GIIM Note: maturase Location: 7258-7462 bp Feature: domain Description: GIIM Note: maturase Location: 72 58-7462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), Cupin_2 (pfam07883), YncA (COG1247), RVT-GII, GIIM (pfam08388)

Seq: LPCQ01000263.1 Burkholderia vietnamiensis strain AU26564 AU26564_58, whole genome shotgun sequence (46791 bp)
Overview 1 RT 1: 39630-42358 bp Neighborhood of RT #1 [39630, 42358] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 39630-40094 bp Feature: domain Description: DUF1566 Location: 39891-40071 bp Feature: domain Description: DUF1566 Location: 3 9891-40071 bp Feature: gene Location: 40109-40465 bp Feature: domain Description: Avd_like Location: 40136-40442 bp Feature: domain Description: Avd_like Location: 4013 6-40442 bp Feature: gene Location: 40810-41820 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40900-41659 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40900-41659 bp Feature: gene Location: 41817-42155 bp Feature: gene Location: 42152-42358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: LPCQ01000232.1 Burkholderia vietnamiensis strain AU26564 AU26564_308, whole genome shotgun sequence (147981 bp)
Overview 1 RT 1: 46107-49008 bp Neighborhood of RT #1 [46107, 49008] Avd_like RVT-DGRs Feature: gene Location: 46107-46592 bp Feature: gene Location: 46607-46984 bp Feature: domain Description: Avd_like Location: 46634-46940 bp Feature: domain Description: Avd_like Location: 4 6634 -4 694 0 bp Feature: gene Location: 47328-48305 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 47403-48168 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 74 03-4 8168 bp Feature: gene Location: 48320-48667 bp Feature: gene Location: 48664-49008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs