myRT

myRT report for GCA_001528945.1_ASM152894v1

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Seq: LPDQ01000087.1 Burkholderia ubonensis strain MSMB1140WGS MSMB1140WGS_65, whole genome shotgun sequence (26005 bp)
Overview 1 RT 1: 11198-16065 bp Neighborhood of RT #1 [11198, 16065] AraC VOC RVT-Retrons HTH_32 DDE_3 Feature: gene Location: 11198-12025 bp Feature: domain Description: AraC Location: 11660-12014 bp Feature: domain Description: AraC Location: 1 1 660-1 201 4 bp Feature: gene Location: 12464-12850 bp Feature: domain Description: VOC Location: 12479-12800 bp Feature: domain Description: VOC Location: 1 2479-1 2800 bp Feature: gene Location: 13153-14502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13618-14254 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 361 8-1 4254 bp Feature: gene Location: 14772-15854 bp Feature: domain Description: HTH_32 Location: 14958-15195 bp Feature: domain Description: HTH_32 Location: 1 4958-1 51 95 bp Feature: domain Description: DDE_3 Location: 15318-15756 bp Feature: domain Description: DDE_3 Location: 1 531 8-1 5756 bp Feature: gene Location: 15877-16065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, HTH_32 (pfam13565), DDE_3 (pfam13358)

Seq: LPDQ01000116.1 Burkholderia ubonensis strain MSMB1140WGS MSMB1140WGS_91, whole genome shotgun sequence (1807 bp)
Overview 1 RT 1: 355-1573 bp Neighborhood of RT #1 [355, 1719] RVT-GII GIIM Feature: gene Location: 355-1719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 688-1303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 688-1303 bp Feature: domain Description: GIIM Note: maturase Location: 1360-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1360-1573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)