myRT

myRT report for GCA_001529215.1_ASM152921v1

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Seq: LPEH01000005.1 Burkholderia ubonensis strain MSMB1218WGS MSMB1218WGS_14, whole genome shotgun sequence (137158 bp)
Overview 1 RT 1: 185-7055 bp Neighborhood of RT #1 [185, 7066] PRK07533 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 185-964 bp Ori: KVU80604.1 Feature: domain Description: PRK07533 Location: 203-959 bp Feature: domain Description: PRK07533 Location: 203-959 bp Feature: gene Location: 1255-3513 bp Ori: KVU80605.1 Feature: domain Description: DUF3141 Location: 1381-3112 bp Feature: domain Description: DUF31 41 Location: 1 381 -31 1 2 bp Feature: gene Location: 3762-5111 bp Ori: KVU80606.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4227-4863 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4227-4863 bp Feature: gene Location: 5414-5800 bp Ori: KVU80607.1 Feature: domain Description: VOC Location: 5429-5750 bp Feature: domain Description: VOC Location: 5429-5750 bp Feature: gene Location: 6239-7066 bp Ori: KVU80608.1 Feature: domain Description: Cupin_6 Location: 6248-6707 bp Feature: domain Description: Cupin_6 Location: 6248-6707 bp Feature: domain Description: AraC Location: 6716-7055 bp Feature: domain Description: AraC Location: 671 6-7055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07533 (enoyl- reductase FabI), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: LPEH01000032.1 Burkholderia ubonensis strain MSMB1218WGS MSMB1218WGS_39, whole genome shotgun sequence (116924 bp)
Overview 1 RT 1: 97245-104973 bp Neighborhood of RT #1 [97245, 104973] bPH_2 HTH_3 RVT-UG8 PinE Feature: gene Location: 97245-97583 bp Ori: KVU76227.1 Feature: domain Description: bPH_2 Location: 97302-97518 bp Feature: domain Description: bPH_2 Location: 97302 -97518 bp Feature: gene Location: 98416-98814 bp Ori: KVU76228.1 Feature: domain Description: HTH_3 Location: 98491-98653 bp Feature: domain Description: HTH_3 Location: 98491-98653 bp Feature: gene Location: 100813-102249 bp Ori: KVU76250.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 100819-101254 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 100819-1012 54 bp Feature: gene Location: 102681-103301 bp Ori: KVU76229.1 Feature: domain Description: PinE Location: 102690-103245 bp Feature: domain Description: PinE Location: 102 690-1032 45 bp Feature: gene Location: 104593-104973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bPH_2 (pfam03703), HTH_3 (pfam01381), RVT-UG8, PinE (COG1961)