myRT

myRT report for GCA_001529295.1_ASM152929v1

Download annotations/find similar RTs

Seq: LLWK01000011.1 Flavobacterium sp. TAB 87 contig000011, whole genome shotgun sequence (3548 bp)
Overview 1 RT 1: 151-2871 bp Neighborhood of RT #1 [151, 2966] Beta-lactamase TPR RVT-GII GIIM Feature: gene Location: 151-1596 bp Feature: domain Description: Beta-lactamase Location: 262-1165 bp Feature: domain Description: Beta-lactamase Location: 262-1 1 65 bp Feature: domain Description: TPR Location: 1348-1555 bp Feature: domain Description: TPR Location: 1 348-1 555 bp Feature: gene Location: 1713-2966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1926-2583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 926-2583 bp Feature: domain Description: GIIM Note: maturase Location: 2679-2871 bp Feature: domain Description: GIIM Note: maturase Location: 2679-2871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta-lactamase (pfam00144), TPR (smart00028), RVT-GII, GIIM (pfam08388)

Seq: LLWK01000007.1 Flavobacterium sp. TAB 87 contig000007, whole genome shotgun sequence (1772 bp)
Overview 1 RT 1: 21-1131 bp Neighborhood of RT #1 [21, 1337] RVT-GII GIIM Feature: gene Location: 21-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 16-834 bp Feature: domain Description: GIIM Note: maturase Location: 906-1131 bp Feature: domain Description: GIIM Note: maturase Location: 906-1131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)