myRT

myRT report for GCA_001529525.1_ASM152952v1

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Seq: LPFA01000026.1 Burkholderia cepacia strain MSMB1339WGS MSMB1339WGS_33, whole genome shotgun sequence (295732 bp)
Overview 1 RT 1: 192104-198957 bp Neighborhood of RT #1 [192104, 198957] Avd_like RVT-DGRs YhdJ YhdJ Feature: gene Location: 192104-192562 bp Feature: gene Location: 192581-192958 bp Ori: KVW15432.1 Feature: domain Description: Avd_like Location: 192608-192914 bp Feature: domain Description: Avd_like Location: 1 92608-1 9291 4 bp Feature: gene Location: 193284-194306 bp Ori: KVW15433.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 193377-194136 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 93377-1 941 36 bp Feature: gene Location: 194332-196005 bp Ori: KVW15434.1 Feature: domain Description: YhdJ Location: 194344-194662 bp Feature: domain Description: YhdJ Location: 1 94344-1 94662 bp Feature: domain Description: YhdJ Location: 195724-195958 bp Feature: domain Description: YhdJ Location: 1 95724-1 95958 bp Feature: gene Location: 197164-198957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YhdJ (COG0863)

Seq: LPFA01000028.1 Burkholderia cepacia strain MSMB1339WGS MSMB1339WGS_35, whole genome shotgun sequence (372990 bp)
Overview 1 RT 1: 121819-126303 bp Neighborhood of RT #1 [121819, 126575] IstB_IS21 RuvB_N RVT-Retrons Feature: gene Location: 121819-124899 bp Ori: KVW14672.1 Feature: domain Description: IstB_IS21 Location: 122311-122431 bp Feature: domain Description: IstB_IS2 1 Location: 12 2 311-12 2 431 bp Feature: domain Description: RuvB_N Location: 123550-123664 bp Feature: domain Description: RuvB_N Location: 12 3550-12 3664 bp Feature: gene Location: 125334-125768 bp Feature: gene Location: 126153-126575 bp Ori: KVW14674.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126159-126303 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 6159-12 6303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RuvB_N (pfam05496), RVT-Retrons

Seq: LPFA01000058.1 Burkholderia cepacia strain MSMB1339WGS MSMB1339WGS_62, whole genome shotgun sequence (202524 bp)
Overview 1 RT 1: 142553-147880 bp Neighborhood of RT #1 [142553, 147880] MFS_MucK Histone_HNS RVT-Retrons FIN Feature: gene Location: 142553-143800 bp Ori: KVW04469.1 Feature: domain Description: MFS_MucK Location: 142643-143777 bp Feature: domain Description: MFS_MucK Location: 142643 -143 777 bp Feature: gene Location: 144097-144426 bp Ori: KVW04470.1 Feature: domain Description: Histone_HNS Location: 144118-144355 bp Feature: domain Description: Histone_HNS Location: 144118-1443 55 bp Feature: gene Location: 144809-146158 bp Ori: KVW04471.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145274-145910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145274-145910 bp Feature: gene Location: 146412-146984 bp Ori: KVW04472.1 Feature: domain Description: FIN Location: 146589-146946 bp Feature: domain Description: FIN Location: 146589-146946 bp Feature: gene Location: 147608-147880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)