myRT

myRT report for GCA_001529585.1_ASM152958v1

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Seq: LPCN01000042.1 Burkholderia vietnamiensis strain AU21726 AU21726_39, whole genome shotgun sequence (121159 bp)
Overview 1 RT 1: 48934-52230 bp Neighborhood of RT #1 [48934, 52230] CLECT_VCBS Avd_like RVT-DGRs Feature: gene Location: 48934-49395 bp Ori: KVR83063.1 Feature: domain Description: CLECT_VCBS Location: 49141-49303 bp Feature: domain Description: CLECT_VCBS Location: 491 41 -49303 bp Feature: gene Location: 49410-49787 bp Ori: KVR83064.1 Feature: domain Description: Avd_like Location: 49437-49743 bp Feature: domain Description: Avd_like Location: 49437-49743 bp Feature: gene Location: 50113-51108 bp Ori: KVR83135.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50206-50893 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50206-50893 bp Feature: gene Location: 51119-51847 bp Feature: gene Location: 51847-52230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CLECT_VCBS (cd03603), Avd_like (cd16376), RVT-DGRs

Seq: LPCN01000032.1 Burkholderia vietnamiensis strain AU21726 AU21726_3, whole genome shotgun sequence (1844 bp)
Overview 1 RT 1: 384-1596 bp Neighborhood of RT #1 [384, 1754] RVT-GII GIIM Feature: gene Location: 384-1754 bp Ori: KVR84798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 0-1332 bp Feature: domain Description: GIIM Note: maturase Location: 1392-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1392 -1596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LPCN01000092.1 Burkholderia vietnamiensis strain AU21726 AU21726_84, whole genome shotgun sequence (204188 bp)
Overview 1 RT 1: 174585-181556 bp Neighborhood of RT #1 [174585, 181648] MFS_MMR_MDR_like Acetyltransf_1 RVT-UG17 SLATT_5 HEPN_LA2681 Feature: gene Location: 174585-176009 bp Ori: KVR76131.1 Feature: domain Description: MFS_MMR_MDR_like Location: 174642-175962 bp Feature: domain Description: MFS_MMR_MDR_like Location: 174642-175962 bp Feature: gene Location: 176149-176604 bp Ori: KVR76132.1 Feature: domain Description: Acetyltransf_1 Location: 176230-176530 bp Feature: domain Description: Acetyltransf_1 Location: 17623 0-17653 0 bp Feature: gene Location: 176947-178353 bp Ori: KVR76133.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 177181-177796 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 177181-177796 bp Feature: gene Location: 178678-179205 bp Ori: KVR76134.1 Feature: domain Description: SLATT_5 Location: 178681-179164 bp Feature: domain Description: SLATT_5 Location: 178681-179164 bp Feature: gene Location: 180629-181648 bp Ori: KVR76135.1 Feature: domain Description: HEPN_LA2681 Location: 180935-181556 bp Feature: domain Description: HEPN_LA2681 Location: 18093 5-181556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), Acetyltransf_1 (pfam00583), RVT-UG17, SLATT_5 (pfam18160), HEPN_LA2681 (pfam18733)