myRT

myRT report for GCA_001529655.1_ASM152965v1

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Seq: LPFI01000076.1 Burkholderia ubonensis strain MSMB1472WGS MSMB1472WGS_79, whole genome shotgun sequence (113927 bp)
Overview 1 RT 1: 38263-42519 bp Neighborhood of RT #1 [38263, 42593] INT_Rci_Hp1_C HTH_XRE RVT-Retrons Phage_int_SAM_1 INT_C_like_6 DUF2513 Feature: gene Location: 38263-39390 bp Ori: KVW61704.1 Feature: domain Description: INT_Rci_Hp1_C Location: 38830-39355 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 38830-39355 bp Feature: gene Location: 39964-40275 bp Ori: KVW61705.1 Feature: domain Description: HTH_XRE Location: 39976-40147 bp Feature: domain Description: HTH_XRE Location: 39976-401 47 bp Feature: gene Location: 40376-41251 bp Ori: KVW61706.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40454-40988 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40454-40988 bp Feature: gene Location: 41255-42217 bp Ori: KVW61707.1 Feature: domain Description: Phage_int_SAM_1 Location: 41372-41570 bp Feature: domain Description: Phage_int_SAM_1 Location: 41 372-41 570 bp Feature: domain Description: INT_C_like_6 Location: 41660-42200 bp Feature: domain Description: INT_C_like_6 Location: 41 660-42200 bp Feature: gene Location: 42210-42593 bp Ori: KVW61708.1 Feature: domain Description: DUF2513 Location: 42216-42519 bp Feature: domain Description: DUF251 3 Location: 4221 6-4251 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), HTH_XRE (smart00530), RVT-Retrons, Phage_int_SAM_1 (pfam02899), INT_C_like_6 (cd01196), DUF2513 (pfam10711)

Seq: LPFI01000050.1 Burkholderia ubonensis strain MSMB1472WGS MSMB1472WGS_55, whole genome shotgun sequence (49852 bp)
Overview 1 RT 1: 340-7210 bp Neighborhood of RT #1 [340, 7221] PRK07533 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 340-1119 bp Ori: KVW66158.1 Feature: domain Description: PRK07533 Location: 358-1114 bp Feature: domain Description: PRK07533 Location: 358-1114 bp Feature: gene Location: 1410-3668 bp Ori: KVW66159.1 Feature: domain Description: DUF3141 Location: 1536-3258 bp Feature: domain Description: DUF3141 Location: 1536-32 58 bp Feature: gene Location: 3917-5266 bp Ori: KVW66160.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4382-5018 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4382 -5018 bp Feature: gene Location: 5569-5955 bp Ori: KVW66161.1 Feature: domain Description: VOC Location: 5584-5905 bp Feature: domain Description: VOC Location: 5584-5905 bp Feature: gene Location: 6394-7221 bp Ori: KVW66162.1 Feature: domain Description: Cupin_6 Location: 6403-6862 bp Feature: domain Description: Cupin_6 Location: 6403-6862 bp Feature: domain Description: AraC Location: 6871-7210 bp Feature: domain Description: AraC Location: 6871-72 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07533 (enoyl- reductase FabI), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)